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Cluster: CGMR064832_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_108202 k141_108202_32 49512 51389 + PL35
pfam k141_108202 k141_108202_33 51411 52583 + Alginate_lyase
CAZyme k141_108202 k141_108202_34 52606 53847 + GH88
STP k141_108202 k141_108202_35 53990 54937 + PALP
CAZyme k141_108202 k141_108202_36 55082 57487 - GH3
CAZyme k141_108202 k141_108202_37 57496 59787 - GH3
CAZyme k141_108202 k141_108202_38 59828 61465 - GH5_38
NULL(UNKNOWN) k141_108202 k141_108202_39 61487 61876 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_108202 k141_108202_40 61911 63533 - SusD-like | SusD-like_2
TC k141_108202 k141_108202_41 63547 66726 - 1.B.14.6.2
Gene ID: k141_108202_32
Type: CAZyme
Location: 49512 - 51389 (+)
Gene ID: k141_108202_33
Type: pfam
Location: 51411 - 52583 (+)
Gene ID: k141_108202_34
Type: CAZyme
Location: 52606 - 53847 (+)
Gene ID: k141_108202_35
Type: STP
Location: 53990 - 54937 (+)
Gene ID: k141_108202_36
Type: CAZyme
Location: 55082 - 57487 (-)
Gene ID: k141_108202_37
Type: CAZyme
Location: 57496 - 59787 (-)
Gene ID: k141_108202_38
Type: CAZyme
Location: 59828 - 61465 (-)
Gene ID: k141_108202_39
Type:
Location: 61487 - 61876 (-)
Gene ID: k141_108202_40
Type: pfam
Location: 61911 - 63533 (-)
Gene ID: k141_108202_41
Type: TC
Location: 63547 - 66726 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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