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Cluster: CGMR064832_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_12484 k141_12484_2 69 1718 + CBM91 | GH43_10
CAZyme k141_12484 k141_12484_3 1768 2988 + GH88
pfam k141_12484 k141_12484_4 3108 3587 - NlpE
TC k141_12484 k141_12484_5 3640 4926 - 9.A.40.2.2
peptidase k141_12484 k141_12484_6 5111 5893 - M48.UPC
TC k141_12484 k141_12484_7 5913 8291 - 1.B.14.6.5
pfam k141_12484 k141_12484_8 8407 8841 + DUF2007
CAZyme k141_12484 k141_12484_9 8865 9683 + CE1
Gene ID: k141_12484_2
Type: CAZyme
Location: 69 - 1718 (+)
Gene ID: k141_12484_3
Type: CAZyme
Location: 1768 - 2988 (+)
Gene ID: k141_12484_4
Type: pfam
Location: 3108 - 3587 (-)
Gene ID: k141_12484_5
Type: TC
Location: 3640 - 4926 (-)
Gene ID: k141_12484_6
Type: peptidase
Location: 5111 - 5893 (-)
Gene ID: k141_12484_7
Type: TC
Location: 5913 - 8291 (-)
Gene ID: k141_12484_8
Type: pfam
Location: 8407 - 8841 (+)
Gene ID: k141_12484_9
Type: CAZyme
Location: 8865 - 9683 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12484_2 vegan > omnivore 1.03469 0.00085

🧭 Explore Read Mapping of CGC

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