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Cluster: CGMR064832_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_88762 k141_88762_179 253573 256887 + GH106
CAZyme k141_88762 k141_88762_180 256982 258415 + CE20
CAZyme k141_88762 k141_88762_181 258426 260738 + GH139
CAZyme k141_88762 k141_88762_182 260746 263385 + GH2
TF k141_88762 k141_88762_183 263513 267907 + HTH_AraC
CAZyme k141_88762 k141_88762_184 267966 269648 + PL1_2
CAZyme k141_88762 k141_88762_185 269679 272780 + PL29
STP k141_88762 k141_88762_186 272960 273508 + Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) k141_88762 k141_88762_187 273593 273844 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_88762 k141_88762_188 274044 274811 + 2.A.79.2.1
Gene ID: k141_88762_179
Type: CAZyme
Location: 253573 - 256887 (+)
Gene ID: k141_88762_180
Type: CAZyme
Location: 256982 - 258415 (+)
Gene ID: k141_88762_181
Type: CAZyme
Location: 258426 - 260738 (+)
Gene ID: k141_88762_182
Type: CAZyme
Location: 260746 - 263385 (+)
Gene ID: k141_88762_183
Type: TF
Location: 263513 - 267907 (+)
Gene ID: k141_88762_184
Type: CAZyme
Location: 267966 - 269648 (+)
Gene ID: k141_88762_185
Type: CAZyme
Location: 269679 - 272780 (+)
Gene ID: k141_88762_186
Type: STP
Location: 272960 - 273508 (+)
Gene ID: k141_88762_187
Type:
Location: 273593 - 273844 (+)
Gene ID: k141_88762_188
Type: TC
Location: 274044 - 274811 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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