Cluster: CGMR064832_CGC16
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR064832
- CGC Family ID: CGCFAM_03108
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_88762 | k141_88762_161 | 217615 | 220863 | + | 1.B.14.6.1 |
| sulfatase | k141_88762 | k141_88762_162 | 220884 | 222632 | + | S1_27 |
| CAZyme | k141_88762 | k141_88762_163 | 222649 | 224331 | + | GH165 |
| CAZyme | k141_88762 | k141_88762_164 | 224345 | 226057 | + | GH165 |
| pfam | k141_88762 | k141_88762_165 | 226070 | 227632 | + | PKD | PQQ_2 | PKD_4 | K319L-like_PKD |
| CAZyme | k141_88762 | k141_88762_166 | 227655 | 229199 | + | GH165 |
| NULL(UNKNOWN) | k141_88762 | k141_88762_167 | 229325 | 229534 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_88762 | k141_88762_168 | 229647 | 232079 | - | 2.A.21.9.2 |
| CAZyme | k141_88762 | k141_88762_169 | 232301 | 235000 | + | GH138 |
| CAZyme | k141_88762 | k141_88762_170 | 235010 | 239209 | + | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | k141_88762 | k141_88762_171 | 239373 | 242654 | + | GH2 |
| CAZyme | k141_88762 | k141_88762_172 | 242690 | 245542 | + | GH2 |
| TF | k141_88762 | k141_88762_173 | 245499 | 246371 | + | Trans_reg_C |
| STP | k141_88762 | k141_88762_174 | 246368 | 247735 | + | HATPase_c | HisKA |
| TC | k141_88762 | k141_88762_175 | 247871 | 250519 | + | 3.A.3.4.1 |
Gene ID: k141_88762_161
Type: TC
Location: 217615 - 220863 (+)
Type: TC
Location: 217615 - 220863 (+)
Gene ID: k141_88762_162
Type: sulfatase
Location: 220884 - 222632 (+)
Type: sulfatase
Location: 220884 - 222632 (+)
Gene ID: k141_88762_163
Type: CAZyme
Location: 222649 - 224331 (+)
Type: CAZyme
Location: 222649 - 224331 (+)
Gene ID: k141_88762_164
Type: CAZyme
Location: 224345 - 226057 (+)
Type: CAZyme
Location: 224345 - 226057 (+)
Gene ID: k141_88762_165
Type: pfam
Location: 226070 - 227632 (+)
Type: pfam
Location: 226070 - 227632 (+)
Gene ID: k141_88762_166
Type: CAZyme
Location: 227655 - 229199 (+)
Type: CAZyme
Location: 227655 - 229199 (+)
Gene ID: k141_88762_167
Type:
Location: 229325 - 229534 (-)
Type:
Location: 229325 - 229534 (-)
Gene ID: k141_88762_168
Type: TC
Location: 229647 - 232079 (-)
Type: TC
Location: 229647 - 232079 (-)
Gene ID: k141_88762_169
Type: CAZyme
Location: 232301 - 235000 (+)
Type: CAZyme
Location: 232301 - 235000 (+)
Gene ID: k141_88762_170
Type: CAZyme
Location: 235010 - 239209 (+)
Type: CAZyme
Location: 235010 - 239209 (+)
Gene ID: k141_88762_171
Type: CAZyme
Location: 239373 - 242654 (+)
Type: CAZyme
Location: 239373 - 242654 (+)
Gene ID: k141_88762_172
Type: CAZyme
Location: 242690 - 245542 (+)
Type: CAZyme
Location: 242690 - 245542 (+)
Gene ID: k141_88762_173
Type: TF
Location: 245499 - 246371 (+)
Type: TF
Location: 245499 - 246371 (+)
Gene ID: k141_88762_174
Type: STP
Location: 246368 - 247735 (+)
Type: STP
Location: 246368 - 247735 (+)
Gene ID: k141_88762_175
Type: TC
Location: 247871 - 250519 (+)
Type: TC
Location: 247871 - 250519 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_88762_167 | vegan > omnivore | 1.37668 | 0.00085 |