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Cluster: CGMR064832_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_88762 k141_88762_104 123783 124880 - GH18
TC k141_88762 k141_88762_105 124930 126567 - 8.A.46.2.2
TC k141_88762 k141_88762_106 126579 129881 - 1.B.14.6.13
pfam k141_88762 k141_88762_107 130259 131494 + Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5
TC k141_88762 k141_88762_108 131711 134455 + 1.B.14.6.13
TC k141_88762 k141_88762_109 134473 136023 + 8.A.46.2.1
CAZyme k141_88762 k141_88762_110 136051 137190 + GH18
pfam k141_88762 k141_88762_111 137199 138398 + BT_3987-like_N | Laminin_G_3
pfam k141_88762 k141_88762_112 138422 139369 + F5_F8_type_C | DUF4999 | F5_F8_type_C_2
CAZyme k141_88762 k141_88762_113 139630 141834 + GH163
pfam k141_88762 k141_88762_114 141933 143258 + MFS_1 | MFS_1
CAZyme k141_88762 k141_88762_115 143280 144248 + GH130_2
CAZyme k141_88762 k141_88762_116 144256 146520 + GH92
pfam k141_88762 k141_88762_117 146821 147711 + AP_endonuc_2
pfam k141_88762 k141_88762_118 148039 149511 + DUF4957 | DUF4992 | DUF5123
TC k141_88762 k141_88762_119 149542 152850 + 1.B.14.6.2
pfam k141_88762 k141_88762_120 152865 155081 + SusD_RagB | SusD-like_3
pfam k141_88762 k141_88762_121 156078 157535 + DUF4957 | DUF4992 | DUF5123
TC k141_88762 k141_88762_122 157549 160860 + 1.B.14.6.2
Gene ID: k141_88762_104
Type: CAZyme
Location: 123783 - 124880 (-)
Gene ID: k141_88762_105
Type: TC
Location: 124930 - 126567 (-)
Gene ID: k141_88762_106
Type: TC
Location: 126579 - 129881 (-)
Gene ID: k141_88762_107
Type: pfam
Location: 130259 - 131494 (+)
Gene ID: k141_88762_108
Type: TC
Location: 131711 - 134455 (+)
Gene ID: k141_88762_109
Type: TC
Location: 134473 - 136023 (+)
Gene ID: k141_88762_110
Type: CAZyme
Location: 136051 - 137190 (+)
Gene ID: k141_88762_111
Type: pfam
Location: 137199 - 138398 (+)
Gene ID: k141_88762_112
Type: pfam
Location: 138422 - 139369 (+)
Gene ID: k141_88762_113
Type: CAZyme
Location: 139630 - 141834 (+)
Gene ID: k141_88762_114
Type: pfam
Location: 141933 - 143258 (+)
Gene ID: k141_88762_115
Type: CAZyme
Location: 143280 - 144248 (+)
Gene ID: k141_88762_116
Type: CAZyme
Location: 144256 - 146520 (+)
Gene ID: k141_88762_117
Type: pfam
Location: 146821 - 147711 (+)
Gene ID: k141_88762_118
Type: pfam
Location: 148039 - 149511 (+)
Gene ID: k141_88762_119
Type: TC
Location: 149542 - 152850 (+)
Gene ID: k141_88762_120
Type: pfam
Location: 152865 - 155081 (+)
Gene ID: k141_88762_121
Type: pfam
Location: 156078 - 157535 (+)
Gene ID: k141_88762_122
Type: TC
Location: 157549 - 160860 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_88762_106 vegan > omnivore 1.18881 0.00085
k141_88762_110 vegan > omnivore 1.54513 0.00085
k141_88762_111 vegan > omnivore 1.03733 0.00085
k141_88762_117 vegan > omnivore 1.03171 0.00085

🧭 Explore Read Mapping of CGC

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