dbCAN Logo

Cluster: CGMR064832_CGC122

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_55261 k141_55261_37 46563 47762 + GH88
TF k141_55261 k141_55261_38 47960 52099 + HTH_AraC
CAZyme k141_55261 k141_55261_39 52565 55168 + PL15_2
TC k141_55261 k141_55261_40 55193 55933 + 9.B.171.1.2
pfam k141_55261 k141_55261_41 55973 56983 + DUF6562
NULL(UNKNOWN) k141_55261 k141_55261_42 57032 58588 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_55261 k141_55261_43 58720 61272 + PL15
TC k141_55261 k141_55261_44 61319 64531 + 1.B.14.6.1
TC k141_55261 k141_55261_45 64552 66246 + 8.A.46.1.3
Gene ID: k141_55261_37
Type: CAZyme
Location: 46563 - 47762 (+)
Gene ID: k141_55261_38
Type: TF
Location: 47960 - 52099 (+)
Gene ID: k141_55261_39
Type: CAZyme
Location: 52565 - 55168 (+)
Gene ID: k141_55261_40
Type: TC
Location: 55193 - 55933 (+)
Gene ID: k141_55261_41
Type: pfam
Location: 55973 - 56983 (+)
Gene ID: k141_55261_42
Type:
Location: 57032 - 58588 (+)
Gene ID: k141_55261_43
Type: CAZyme
Location: 58720 - 61272 (+)
Gene ID: k141_55261_44
Type: TC
Location: 61319 - 64531 (+)
Gene ID: k141_55261_45
Type: TC
Location: 64552 - 66246 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_55261_42 vegan > omnivore 1.19505 0.00085

🧭 Explore Read Mapping of CGC

← Back to Cluster List