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Cluster: CGMR064832_CGC117

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_55080 k141_55080_11 11622 14984 + 1.B.14.6.13
TC k141_55080 k141_55080_12 14997 16598 + 8.A.46.2.2
CAZyme k141_55080 k141_55080_13 16641 17654 + GH18
pfam k141_55080 k141_55080_14 17679 18674 + F5_F8_type_C | BT_3987-like_N | F5_F8_type_C_2
pfam k141_55080 k141_55080_15 18686 19900 + BT_3987-like_N | Laminin_G_3
CAZyme k141_55080 k141_55080_16 20053 22404 + GH3
NULL(UNKNOWN) k141_55080 k141_55080_17 22895 24238 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_55080 k141_55080_18 24262 27699 + 1.B.14.6.1
Gene ID: k141_55080_11
Type: TC
Location: 11622 - 14984 (+)
Gene ID: k141_55080_12
Type: TC
Location: 14997 - 16598 (+)
Gene ID: k141_55080_13
Type: CAZyme
Location: 16641 - 17654 (+)
Gene ID: k141_55080_14
Type: pfam
Location: 17679 - 18674 (+)
Gene ID: k141_55080_15
Type: pfam
Location: 18686 - 19900 (+)
Gene ID: k141_55080_16
Type: CAZyme
Location: 20053 - 22404 (+)
Gene ID: k141_55080_17
Type:
Location: 22895 - 24238 (+)
Gene ID: k141_55080_18
Type: TC
Location: 24262 - 27699 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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