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Cluster: CGMR064832_CGC108

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_90080 k141_90080_6 8657 10153 - PL1_2
CAZyme k141_90080 k141_90080_7 10189 11856 - PL1_2
CAZyme k141_90080 k141_90080_8 11890 13464 - PL1_2
CAZyme k141_90080 k141_90080_9 13558 15201 - CE8
pfam k141_90080 k141_90080_10 15276 17162 - DUF5123
pfam k141_90080 k141_90080_11 17181 19085 - SusD_RagB | SusD-like_3
TC k141_90080 k141_90080_12 19111 22359 - 1.B.14.6.1
TC k141_90080 k141_90080_13 22714 23514 + 9.B.116.3.2
Gene ID: k141_90080_6
Type: CAZyme
Location: 8657 - 10153 (-)
Gene ID: k141_90080_7
Type: CAZyme
Location: 10189 - 11856 (-)
Gene ID: k141_90080_8
Type: CAZyme
Location: 11890 - 13464 (-)
Gene ID: k141_90080_9
Type: CAZyme
Location: 13558 - 15201 (-)
Gene ID: k141_90080_10
Type: pfam
Location: 15276 - 17162 (-)
Gene ID: k141_90080_11
Type: pfam
Location: 17181 - 19085 (-)
Gene ID: k141_90080_12
Type: TC
Location: 19111 - 22359 (-)
Gene ID: k141_90080_13
Type: TC
Location: 22714 - 23514 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_90080_7 vegan > omnivore 1.11426 0.00085
k141_90080_7 vegetarian > omnivore 1.12494 0.04939
k141_90080_12 vegetarian > omnivore 2.10276 0.01938

🧭 Explore Read Mapping of CGC

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