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Cluster: CGMR064832_CGC105

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39852 k141_39852_73 86121 88559 - PL30
pfam k141_39852 k141_39852_74 88565 89494 - DUF5017
TC k141_39852 k141_39852_75 89512 91134 - 8.A.46.1.3
TC k141_39852 k141_39852_76 91158 94322 - 1.B.14.6.1
CAZyme k141_39852 k141_39852_77 94387 95586 - GH88
TF k141_39852 k141_39852_78 95858 99850 + HTH_AraC
CAZyme k141_39852 k141_39852_79 99957 101093 + GH117 | GH117
CAZyme k141_39852 k141_39852_80 101140 103167 + PL8
Gene ID: k141_39852_73
Type: CAZyme
Location: 86121 - 88559 (-)
Gene ID: k141_39852_74
Type: pfam
Location: 88565 - 89494 (-)
Gene ID: k141_39852_75
Type: TC
Location: 89512 - 91134 (-)
Gene ID: k141_39852_76
Type: TC
Location: 91158 - 94322 (-)
Gene ID: k141_39852_77
Type: CAZyme
Location: 94387 - 95586 (-)
Gene ID: k141_39852_78
Type: TF
Location: 95858 - 99850 (+)
Gene ID: k141_39852_79
Type: CAZyme
Location: 99957 - 101093 (+)
Gene ID: k141_39852_80
Type: CAZyme
Location: 101140 - 103167 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_39852_80 vegan > omnivore 1.00613 0.00085

🧭 Explore Read Mapping of CGC

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