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Cluster: CGMR064832_CGC104

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39852 k141_39852_49 52398 53507 - GH33
pfam k141_39852 k141_39852_50 53520 54977 - SusD_RagB | SusD-like_2 | SusD-like_3
TC k141_39852 k141_39852_51 54995 58258 - 1.B.14.6.1
CAZyme k141_39852 k141_39852_52 58329 59753 - CE20
TC k141_39852 k141_39852_53 59772 61007 - 2.A.1.14.14
CAZyme k141_39852 k141_39852_54 61011 62651 - GH33
Gene ID: k141_39852_49
Type: CAZyme
Location: 52398 - 53507 (-)
Gene ID: k141_39852_50
Type: pfam
Location: 53520 - 54977 (-)
Gene ID: k141_39852_51
Type: TC
Location: 54995 - 58258 (-)
Gene ID: k141_39852_52
Type: CAZyme
Location: 58329 - 59753 (-)
Gene ID: k141_39852_53
Type: TC
Location: 59772 - 61007 (-)
Gene ID: k141_39852_54
Type: CAZyme
Location: 61011 - 62651 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_39852_49 vegan > omnivore 1.62924 0.00085
k141_39852_50 vegan > omnivore 1.08488 0.00085
k141_39852_51 vegan > omnivore 1.12387 0.00085
k141_39852_52 vegan > omnivore 1.04350 0.00085
k141_39852_53 vegan > omnivore 1.13248 0.00085
k141_39852_54 vegan > omnivore 1.24522 0.00085

🧭 Explore Read Mapping of CGC

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