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Cluster: CGMR064832_CGC100

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_71898 k141_71898_16 21622 23109 + GH30_2
pfam k141_71898 k141_71898_17 23129 23287 - Imm9
STP k141_71898 k141_71898_18 23504 24112 - TetR_N
TC k141_71898 k141_71898_19 24123 25487 - 1.B.17.3.5
TC k141_71898 k141_71898_20 25507 28704 - 2.A.6.2.22
TC k141_71898 k141_71898_21 28723 29868 - 2.A.6.2.4
TF k141_71898 k141_71898_22 30027 30875 + HTH_AraC
pfam k141_71898 k141_71898_23 31567 32886 + OEP | OEP
TC k141_71898 k141_71898_24 32934 33968 + 8.A.1.1.2
Gene ID: k141_71898_16
Type: CAZyme
Location: 21622 - 23109 (+)
Gene ID: k141_71898_17
Type: pfam
Location: 23129 - 23287 (-)
Gene ID: k141_71898_18
Type: STP
Location: 23504 - 24112 (-)
Gene ID: k141_71898_19
Type: TC
Location: 24123 - 25487 (-)
Gene ID: k141_71898_20
Type: TC
Location: 25507 - 28704 (-)
Gene ID: k141_71898_21
Type: TC
Location: 28723 - 29868 (-)
Gene ID: k141_71898_22
Type: TF
Location: 30027 - 30875 (+)
Gene ID: k141_71898_23
Type: pfam
Location: 31567 - 32886 (+)
Gene ID: k141_71898_24
Type: TC
Location: 32934 - 33968 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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