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Cluster: CGMR064804_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_223699 k141_223699_28 30740 31909 - GT4
pfam k141_223699 k141_223699_29 32002 33588 + GTP_EFTU | Arf | MMR_HSR1 | RF3_C | EF-G_D2
TC k141_223699 k141_223699_30 33599 34003 + 1.E.14.1.6
TC k141_223699 k141_223699_31 34000 34704 + 2.A.122.1.7
pfam k141_223699 k141_223699_32 34779 35873 - Redoxin | DUF4369
pfam k141_223699 k141_223699_33 35898 37016 - DUF4369
TC k141_223699 k141_223699_34 37091 38743 - 3.A.1.5.27
Gene ID: k141_223699_28
Type: CAZyme
Location: 30740 - 31909 (-)
Gene ID: k141_223699_29
Type: pfam
Location: 32002 - 33588 (+)
Gene ID: k141_223699_30
Type: TC
Location: 33599 - 34003 (+)
Gene ID: k141_223699_31
Type: TC
Location: 34000 - 34704 (+)
Gene ID: k141_223699_32
Type: pfam
Location: 34779 - 35873 (-)
Gene ID: k141_223699_33
Type: pfam
Location: 35898 - 37016 (-)
Gene ID: k141_223699_34
Type: TC
Location: 37091 - 38743 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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