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Cluster: CGMR064804_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_8653 k141_8653_26 26553 27854 + 2.A.6.6.11
pfam k141_8653 k141_8653_27 28297 29490 + OmpA
TC k141_8653 k141_8653_28 29577 31496 + 9.B.18.2.1
pfam k141_8653 k141_8653_29 31489 32214 + CpsB_CapC
pfam k141_8653 k141_8653_30 32201 32959 + Poly_export | SLBB | SLBB_2
TC k141_8653 k141_8653_31 32979 35282 + 8.A.3.3.4
TC k141_8653 k141_8653_32 35289 35882 - 9.B.18.1.3
pfam k141_8653 k141_8653_33 35882 37093 - Aminotran_1_2 | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1
CAZyme k141_8653 k141_8653_34 37107 38126 - GT2
pfam k141_8653 k141_8653_35 38123 39442 - AMP-binding
CAZyme k141_8653 k141_8653_36 39462 40511 - GT4
pfam k141_8653 k141_8653_37 40492 41175 - Methyltransf_11 | Methyltransf_23 | Methyltransf_31
CAZyme k141_8653 k141_8653_38 41183 42073 - CE4
Gene ID: k141_8653_26
Type: TC
Location: 26553 - 27854 (+)
Gene ID: k141_8653_27
Type: pfam
Location: 28297 - 29490 (+)
Gene ID: k141_8653_28
Type: TC
Location: 29577 - 31496 (+)
Gene ID: k141_8653_29
Type: pfam
Location: 31489 - 32214 (+)
Gene ID: k141_8653_30
Type: pfam
Location: 32201 - 32959 (+)
Gene ID: k141_8653_31
Type: TC
Location: 32979 - 35282 (+)
Gene ID: k141_8653_32
Type: TC
Location: 35289 - 35882 (-)
Gene ID: k141_8653_33
Type: pfam
Location: 35882 - 37093 (-)
Gene ID: k141_8653_34
Type: CAZyme
Location: 37107 - 38126 (-)
Gene ID: k141_8653_35
Type: pfam
Location: 38123 - 39442 (-)
Gene ID: k141_8653_36
Type: CAZyme
Location: 39462 - 40511 (-)
Gene ID: k141_8653_37
Type: pfam
Location: 40492 - 41175 (-)
Gene ID: k141_8653_38
Type: CAZyme
Location: 41183 - 42073 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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