Cluster: CGMR064757_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR064757
- CGC Family ID: CGCFAM_00229
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_146697 | k141_146697_2 | 4839 | 6689 | - | PL11_1 |
| CAZyme | k141_146697 | k141_146697_3 | 6764 | 9724 | - | GH2 |
| pfam | k141_146697 | k141_146697_4 | 10483 | 11043 | + | DUF4199 |
| CAZyme | k141_146697 | k141_146697_5 | 11063 | 12022 | + | GT2 |
| pfam | k141_146697 | k141_146697_6 | 12019 | 12495 | + | DUF6452 |
| pfam | k141_146697 | k141_146697_7 | 12452 | 13177 | + | DUF6048 |
| TC | k141_146697 | k141_146697_8 | 13241 | 13813 | + | 2.A.107.1.2 |
Gene ID: k141_146697_2
Type: CAZyme
Location: 4839 - 6689 (-)
Type: CAZyme
Location: 4839 - 6689 (-)
Gene ID: k141_146697_3
Type: CAZyme
Location: 6764 - 9724 (-)
Type: CAZyme
Location: 6764 - 9724 (-)
Gene ID: k141_146697_4
Type: pfam
Location: 10483 - 11043 (+)
Type: pfam
Location: 10483 - 11043 (+)
Gene ID: k141_146697_5
Type: CAZyme
Location: 11063 - 12022 (+)
Type: CAZyme
Location: 11063 - 12022 (+)
Gene ID: k141_146697_6
Type: pfam
Location: 12019 - 12495 (+)
Type: pfam
Location: 12019 - 12495 (+)
Gene ID: k141_146697_7
Type: pfam
Location: 12452 - 13177 (+)
Type: pfam
Location: 12452 - 13177 (+)
Gene ID: k141_146697_8
Type: TC
Location: 13241 - 13813 (+)
Type: TC
Location: 13241 - 13813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.