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Cluster: CGMR064757_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_84077 k141_84077_11 9342 10103 - 9.B.104.3.2
CAZyme k141_84077 k141_84077_12 10204 12207 + GH133
CAZyme k141_84077 k141_84077_13 12227 13498 + GT4
CAZyme k141_84077 k141_84077_14 13516 14919 + GH57
pfam k141_84077 k141_84077_15 15414 16841 - DUF4270
CAZyme k141_84077 k141_84077_16 16866 17687 - GT5
pfam k141_84077 k141_84077_17 17936 18784 + Pantoate_ligase
pfam k141_84077 k141_84077_18 18799 19149 + Asp_decarbox
TC k141_84077 k141_84077_19 19834 20994 - 3.B.1.1.2
TC k141_84077 k141_84077_20 20996 21433 - 3.B.1.1.2
pfam k141_84077 k141_84077_21 21470 22405 - LTD | OAD_gamma
TC k141_84077 k141_84077_22 22428 23981 - 3.B.1.1.2
Gene ID: k141_84077_11
Type: TC
Location: 9342 - 10103 (-)
Gene ID: k141_84077_12
Type: CAZyme
Location: 10204 - 12207 (+)
Gene ID: k141_84077_13
Type: CAZyme
Location: 12227 - 13498 (+)
Gene ID: k141_84077_14
Type: CAZyme
Location: 13516 - 14919 (+)
Gene ID: k141_84077_15
Type: pfam
Location: 15414 - 16841 (-)
Gene ID: k141_84077_16
Type: CAZyme
Location: 16866 - 17687 (-)
Gene ID: k141_84077_17
Type: pfam
Location: 17936 - 18784 (+)
Gene ID: k141_84077_18
Type: pfam
Location: 18799 - 19149 (+)
Gene ID: k141_84077_19
Type: TC
Location: 19834 - 20994 (-)
Gene ID: k141_84077_20
Type: TC
Location: 20996 - 21433 (-)
Gene ID: k141_84077_21
Type: pfam
Location: 21470 - 22405 (-)
Gene ID: k141_84077_22
Type: TC
Location: 22428 - 23981 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_84077_20 vegan > omnivore 1.28841 0.02677

🧭 Explore Read Mapping of CGC

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