Cluster: CGMR064757_CGC45
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR064757
- CGC Family ID: CGCFAM_00150
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_244279 | k141_244279_16 | 19961 | 23332 | - | 1.B.14.6.1 |
| STP | k141_244279 | k141_244279_17 | 23393 | 24595 | - | FecR |
| STP | k141_244279 | k141_244279_18 | 24768 | 25322 | - | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | k141_244279 | k141_244279_19 | 26028 | 26801 | - | GT2 |
| CAZyme | k141_244279 | k141_244279_20 | 26791 | 28080 | - | GT4 |
Gene ID: k141_244279_16
Type: TC
Location: 19961 - 23332 (-)
Type: TC
Location: 19961 - 23332 (-)
Gene ID: k141_244279_17
Type: STP
Location: 23393 - 24595 (-)
Type: STP
Location: 23393 - 24595 (-)
Gene ID: k141_244279_18
Type: STP
Location: 24768 - 25322 (-)
Type: STP
Location: 24768 - 25322 (-)
Gene ID: k141_244279_19
Type: CAZyme
Location: 26028 - 26801 (-)
Type: CAZyme
Location: 26028 - 26801 (-)
Gene ID: k141_244279_20
Type: CAZyme
Location: 26791 - 28080 (-)
Type: CAZyme
Location: 26791 - 28080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.