Cluster: CGMR064757_CGC44
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR064757
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_105528 | k141_105528_5 | 4342 | 7230 | - | 1.C.105.2.12 |
| pfam | k141_105528 | k141_105528_6 | 7536 | 8597 | + | DHQ_synthase | Fe-ADH_2 | DHQS_C |
| NULL(UNKNOWN) | k141_105528 | k141_105528_7 | 8757 | 11072 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_105528 | k141_105528_8 | 11199 | 13061 | + | GH32 |
| TC | k141_105528 | k141_105528_9 | 13271 | 14449 | + | 2.A.1.7.17 |
| STP | k141_105528 | k141_105528_10 | 14462 | 15349 | + | PfkB |
| TF | k141_105528 | k141_105528_11 | 15450 | 18245 | + | HTH_AraC |
| TC | k141_105528 | k141_105528_12 | 18355 | 21039 | + | 3.A.3.2.39 |
Gene ID: k141_105528_5
Type: TC
Location: 4342 - 7230 (-)
Type: TC
Location: 4342 - 7230 (-)
Gene ID: k141_105528_6
Type: pfam
Location: 7536 - 8597 (+)
Type: pfam
Location: 7536 - 8597 (+)
Gene ID: k141_105528_7
Type:
Location: 8757 - 11072 (+)
Type:
Location: 8757 - 11072 (+)
Gene ID: k141_105528_8
Type: CAZyme
Location: 11199 - 13061 (+)
Type: CAZyme
Location: 11199 - 13061 (+)
Gene ID: k141_105528_9
Type: TC
Location: 13271 - 14449 (+)
Type: TC
Location: 13271 - 14449 (+)
Gene ID: k141_105528_10
Type: STP
Location: 14462 - 15349 (+)
Type: STP
Location: 14462 - 15349 (+)
Gene ID: k141_105528_11
Type: TF
Location: 15450 - 18245 (+)
Type: TF
Location: 15450 - 18245 (+)
Gene ID: k141_105528_12
Type: TC
Location: 18355 - 21039 (+)
Type: TC
Location: 18355 - 21039 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.