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Cluster: CGMR064757_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_36469 k141_36469_6 4635 8114 + 1.B.14.6.1
pfam k141_36469 k141_36469_7 8135 9607 + SusD_RagB | SusD-like_3
pfam k141_36469 k141_36469_8 9704 10906 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369
TC k141_36469 k141_36469_9 11531 12370 + 3.A.1.132.6
NULL(UNKNOWN) k141_36469 k141_36469_10 12384 13232 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_36469 k141_36469_11 13229 13615 + GntR
CAZyme k141_36469 k141_36469_12 13811 16945 - GH2
TC k141_36469 k141_36469_13 17560 18639 - 3.A.1.13.2
TC k141_36469 k141_36469_14 18641 19687 - 3.A.1.13.2
TC k141_36469 k141_36469_15 19684 20805 - 3.A.1.13.2
Gene ID: k141_36469_6
Type: TC
Location: 4635 - 8114 (+)
Gene ID: k141_36469_7
Type: pfam
Location: 8135 - 9607 (+)
Gene ID: k141_36469_8
Type: pfam
Location: 9704 - 10906 (+)
Gene ID: k141_36469_9
Type: TC
Location: 11531 - 12370 (+)
Gene ID: k141_36469_10
Type:
Location: 12384 - 13232 (+)
Gene ID: k141_36469_11
Type: TF
Location: 13229 - 13615 (+)
Gene ID: k141_36469_12
Type: CAZyme
Location: 13811 - 16945 (-)
Gene ID: k141_36469_13
Type: TC
Location: 17560 - 18639 (-)
Gene ID: k141_36469_14
Type: TC
Location: 18641 - 19687 (-)
Gene ID: k141_36469_15
Type: TC
Location: 19684 - 20805 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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