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Cluster: CGMR064757_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_140219 k141_140219_15 26519 27487 + 1.A.34.1.3
TF k141_140219 k141_140219_16 27502 27855 + MerR
STP k141_140219 k141_140219_17 27987 30260 - HD
CAZyme k141_140219 k141_140219_18 30263 31540 - GH23
pfam k141_140219 k141_140219_19 31547 32335 - DUF5683
pfam k141_140219 k141_140219_20 32346 33239 - ParBc | HTH_ParB | ParB_dimer
TC k141_140219 k141_140219_21 33244 34008 - 8.A.3.2.3
pfam k141_140219 k141_140219_22 34194 34958 + SurE
CAZyme k141_140219 k141_140219_23 34960 36093 + GT19
Gene ID: k141_140219_15
Type: TC
Location: 26519 - 27487 (+)
Gene ID: k141_140219_16
Type: TF
Location: 27502 - 27855 (+)
Gene ID: k141_140219_17
Type: STP
Location: 27987 - 30260 (-)
Gene ID: k141_140219_18
Type: CAZyme
Location: 30263 - 31540 (-)
Gene ID: k141_140219_19
Type: pfam
Location: 31547 - 32335 (-)
Gene ID: k141_140219_20
Type: pfam
Location: 32346 - 33239 (-)
Gene ID: k141_140219_21
Type: TC
Location: 33244 - 34008 (-)
Gene ID: k141_140219_22
Type: pfam
Location: 34194 - 34958 (+)
Gene ID: k141_140219_23
Type: CAZyme
Location: 34960 - 36093 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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