Cluster: CGMR064757_CGC32
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR064757
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_72714 | k141_72714_30 | 38439 | 41264 | + | 1.B.14.6.1 |
| pfam | k141_72714 | k141_72714_31 | 41288 | 43198 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_72714 | k141_72714_32 | 43292 | 44302 | - | AI-2E_transport |
| CAZyme | k141_72714 | k141_72714_33 | 45241 | 46755 | - | GH28 |
| NULL(UNKNOWN) | k141_72714 | k141_72714_34 | 46817 | 46909 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_72714 | k141_72714_35 | 47010 | 48290 | - | CE12 |
| CAZyme | k141_72714 | k141_72714_36 | 48587 | 49693 | + | CE4 |
| CAZyme | k141_72714 | k141_72714_37 | 49762 | 51147 | + | GH28 |
| CAZyme | k141_72714 | k141_72714_38 | 51359 | 53110 | - | GH78 |
| CAZyme | k141_72714 | k141_72714_39 | 53143 | 54738 | - | GH27 |
| CAZyme | k141_72714 | k141_72714_40 | 54909 | 57404 | + | GH2 |
| pfam | k141_72714 | k141_72714_41 | 57419 | 58945 | + | SASA | Lipase_GDSL_2 |
| CAZyme | k141_72714 | k141_72714_42 | 59039 | 60340 | + | GH28 |
| pfam | k141_72714 | k141_72714_43 | 61647 | 64004 | + | Fasciclin |
| TC | k141_72714 | k141_72714_44 | 64026 | 67331 | + | 1.B.14.6.1 |
| TC | k141_72714 | k141_72714_45 | 67352 | 68884 | + | 8.A.46.1.2 |
| pfam | k141_72714 | k141_72714_46 | 68895 | 70691 | + | Fasciclin | DUF5108 |
| pfam | k141_72714 | k141_72714_47 | 70696 | 72444 | + | Fasciclin |
| TC | k141_72714 | k141_72714_48 | 72471 | 75611 | + | 1.B.14.6.2 |
Gene ID: k141_72714_30
Type: TC
Location: 38439 - 41264 (+)
Type: TC
Location: 38439 - 41264 (+)
Gene ID: k141_72714_31
Type: pfam
Location: 41288 - 43198 (+)
Type: pfam
Location: 41288 - 43198 (+)
Gene ID: k141_72714_32
Type: pfam
Location: 43292 - 44302 (-)
Type: pfam
Location: 43292 - 44302 (-)
Gene ID: k141_72714_33
Type: CAZyme
Location: 45241 - 46755 (-)
Type: CAZyme
Location: 45241 - 46755 (-)
Gene ID: k141_72714_34
Type:
Location: 46817 - 46909 (-)
Type:
Location: 46817 - 46909 (-)
Gene ID: k141_72714_35
Type: CAZyme
Location: 47010 - 48290 (-)
Type: CAZyme
Location: 47010 - 48290 (-)
Gene ID: k141_72714_36
Type: CAZyme
Location: 48587 - 49693 (+)
Type: CAZyme
Location: 48587 - 49693 (+)
Gene ID: k141_72714_37
Type: CAZyme
Location: 49762 - 51147 (+)
Type: CAZyme
Location: 49762 - 51147 (+)
Gene ID: k141_72714_38
Type: CAZyme
Location: 51359 - 53110 (-)
Type: CAZyme
Location: 51359 - 53110 (-)
Gene ID: k141_72714_39
Type: CAZyme
Location: 53143 - 54738 (-)
Type: CAZyme
Location: 53143 - 54738 (-)
Gene ID: k141_72714_40
Type: CAZyme
Location: 54909 - 57404 (+)
Type: CAZyme
Location: 54909 - 57404 (+)
Gene ID: k141_72714_41
Type: pfam
Location: 57419 - 58945 (+)
Type: pfam
Location: 57419 - 58945 (+)
Gene ID: k141_72714_42
Type: CAZyme
Location: 59039 - 60340 (+)
Type: CAZyme
Location: 59039 - 60340 (+)
Gene ID: k141_72714_43
Type: pfam
Location: 61647 - 64004 (+)
Type: pfam
Location: 61647 - 64004 (+)
Gene ID: k141_72714_44
Type: TC
Location: 64026 - 67331 (+)
Type: TC
Location: 64026 - 67331 (+)
Gene ID: k141_72714_45
Type: TC
Location: 67352 - 68884 (+)
Type: TC
Location: 67352 - 68884 (+)
Gene ID: k141_72714_46
Type: pfam
Location: 68895 - 70691 (+)
Type: pfam
Location: 68895 - 70691 (+)
Gene ID: k141_72714_47
Type: pfam
Location: 70696 - 72444 (+)
Type: pfam
Location: 70696 - 72444 (+)
Gene ID: k141_72714_48
Type: TC
Location: 72471 - 75611 (+)
Type: TC
Location: 72471 - 75611 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.