Cluster: CGMR064757_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR064757
- CGC Family ID: CGCFAM_00304
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_239395 | k141_239395_1 | 225 | 1259 | + | 8.A.1.1.2 |
| NULL(UNKNOWN) | k141_239395 | k141_239395_2 | 1263 | 2843 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_239395 | k141_239395_3 | 2990 | 4246 | - | GH171 |
| NULL(UNKNOWN) | k141_239395 | k141_239395_4 | 4248 | 4706 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_239395 | k141_239395_5 | 4780 | 5655 | - | 1.A.23.4.1 |
| STP | k141_239395 | k141_239395_6 | 5731 | 6267 | + | HD |
| TC | k141_239395 | k141_239395_7 | 6358 | 9087 | + | 1.B.42.1.8 |
Gene ID: k141_239395_1
Type: TC
Location: 225 - 1259 (+)
Type: TC
Location: 225 - 1259 (+)
Gene ID: k141_239395_2
Type:
Location: 1263 - 2843 (+)
Type:
Location: 1263 - 2843 (+)
Gene ID: k141_239395_3
Type: CAZyme
Location: 2990 - 4246 (-)
Type: CAZyme
Location: 2990 - 4246 (-)
Gene ID: k141_239395_4
Type:
Location: 4248 - 4706 (+)
Type:
Location: 4248 - 4706 (+)
Gene ID: k141_239395_5
Type: TC
Location: 4780 - 5655 (-)
Type: TC
Location: 4780 - 5655 (-)
Gene ID: k141_239395_6
Type: STP
Location: 5731 - 6267 (+)
Type: STP
Location: 5731 - 6267 (+)
Gene ID: k141_239395_7
Type: TC
Location: 6358 - 9087 (+)
Type: TC
Location: 6358 - 9087 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.