Cluster: CGMR064757_CGC30
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR064757
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_155847 | k141_155847_7 | 5437 | 6222 | - | GT51 |
| pfam | k141_155847 | k141_155847_8 | 6397 | 7764 | + | HGTP_anticodon | tRNA-synt_His |
| TC | k141_155847 | k141_155847_9 | 8207 | 11449 | + | 1.B.14.6.1 |
| TC | k141_155847 | k141_155847_10 | 11470 | 13224 | + | 8.A.46.1.6 |
| STP | k141_155847 | k141_155847_11 | 13711 | 15306 | + | HATPase_c | HisKA |
| CAZyme | k141_155847 | k141_155847_12 | 15345 | 16898 | + | CBM91 | GH43_10 |
| TC | k141_155847 | k141_155847_13 | 17120 | 20377 | + | 1.B.14.6.1 |
| sulfatase | k141_155847 | k141_155847_14 | 20390 | 22135 | + | S1_27 |
| TF | k141_155847 | k141_155847_15 | 22260 | 26573 | + | HTH_AraC |
| CAZyme | k141_155847 | k141_155847_16 | 26734 | 27870 | + | GH105 |
| pfam | k141_155847 | k141_155847_17 | 27965 | 28429 | + | dCMP_cyt_deam_1 | MafB19-deam |
| TC | k141_155847 | k141_155847_18 | 28839 | 31958 | + | 1.B.14.6.1 |
| pfam | k141_155847 | k141_155847_19 | 31985 | 34270 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_155847 | k141_155847_20 | 34819 | 37845 | + | GH33 | PL10_1 |
| CAZyme | k141_155847 | k141_155847_21 | 37975 | 39597 | + | PL10_2 |
| CAZyme | k141_155847 | k141_155847_22 | 39587 | 41311 | + | CE12 | CE8 |
| CAZyme | k141_155847 | k141_155847_23 | 41641 | 44157 | + | PL1_2 |
Gene ID: k141_155847_7
Type: CAZyme
Location: 5437 - 6222 (-)
Type: CAZyme
Location: 5437 - 6222 (-)
Gene ID: k141_155847_8
Type: pfam
Location: 6397 - 7764 (+)
Type: pfam
Location: 6397 - 7764 (+)
Gene ID: k141_155847_9
Type: TC
Location: 8207 - 11449 (+)
Type: TC
Location: 8207 - 11449 (+)
Gene ID: k141_155847_10
Type: TC
Location: 11470 - 13224 (+)
Type: TC
Location: 11470 - 13224 (+)
Gene ID: k141_155847_11
Type: STP
Location: 13711 - 15306 (+)
Type: STP
Location: 13711 - 15306 (+)
Gene ID: k141_155847_12
Type: CAZyme
Location: 15345 - 16898 (+)
Type: CAZyme
Location: 15345 - 16898 (+)
Gene ID: k141_155847_13
Type: TC
Location: 17120 - 20377 (+)
Type: TC
Location: 17120 - 20377 (+)
Gene ID: k141_155847_14
Type: sulfatase
Location: 20390 - 22135 (+)
Type: sulfatase
Location: 20390 - 22135 (+)
Gene ID: k141_155847_15
Type: TF
Location: 22260 - 26573 (+)
Type: TF
Location: 22260 - 26573 (+)
Gene ID: k141_155847_16
Type: CAZyme
Location: 26734 - 27870 (+)
Type: CAZyme
Location: 26734 - 27870 (+)
Gene ID: k141_155847_17
Type: pfam
Location: 27965 - 28429 (+)
Type: pfam
Location: 27965 - 28429 (+)
Gene ID: k141_155847_18
Type: TC
Location: 28839 - 31958 (+)
Type: TC
Location: 28839 - 31958 (+)
Gene ID: k141_155847_19
Type: pfam
Location: 31985 - 34270 (+)
Type: pfam
Location: 31985 - 34270 (+)
Gene ID: k141_155847_20
Type: CAZyme
Location: 34819 - 37845 (+)
Type: CAZyme
Location: 34819 - 37845 (+)
Gene ID: k141_155847_21
Type: CAZyme
Location: 37975 - 39597 (+)
Type: CAZyme
Location: 37975 - 39597 (+)
Gene ID: k141_155847_22
Type: CAZyme
Location: 39587 - 41311 (+)
Type: CAZyme
Location: 39587 - 41311 (+)
Gene ID: k141_155847_23
Type: CAZyme
Location: 41641 - 44157 (+)
Type: CAZyme
Location: 41641 - 44157 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.