Cluster: CGMR064757_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR064757
- CGC Family ID: CGCFAM_04695
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_120003 | k141_120003_13 | 13771 | 14451 | + | 3.A.1.140.1 |
| pfam | k141_120003 | k141_120003_14 | 14479 | 15795 | + | AA_kinase | ACT_9 |
| pfam | k141_120003 | k141_120003_15 | 15806 | 16966 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| CAZyme | k141_120003 | k141_120003_16 | 17018 | 18187 | + | GT2 |
| pfam | k141_120003 | k141_120003_17 | 18239 | 20434 | - | DEAD | Helicase_C | ResIII |
| CAZyme | k141_120003 | k141_120003_18 | 20507 | 21232 | - | GT26 |
| CAZyme | k141_120003 | k141_120003_19 | 21300 | 21899 | - | GT4 |
Gene ID: k141_120003_13
Type: TC
Location: 13771 - 14451 (+)
Type: TC
Location: 13771 - 14451 (+)
Gene ID: k141_120003_14
Type: pfam
Location: 14479 - 15795 (+)
Type: pfam
Location: 14479 - 15795 (+)
Gene ID: k141_120003_15
Type: pfam
Location: 15806 - 16966 (+)
Type: pfam
Location: 15806 - 16966 (+)
Gene ID: k141_120003_16
Type: CAZyme
Location: 17018 - 18187 (+)
Type: CAZyme
Location: 17018 - 18187 (+)
Gene ID: k141_120003_17
Type: pfam
Location: 18239 - 20434 (-)
Type: pfam
Location: 18239 - 20434 (-)
Gene ID: k141_120003_18
Type: CAZyme
Location: 20507 - 21232 (-)
Type: CAZyme
Location: 20507 - 21232 (-)
Gene ID: k141_120003_19
Type: CAZyme
Location: 21300 - 21899 (-)
Type: CAZyme
Location: 21300 - 21899 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.