Cluster: CGMR064757_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR064757
- CGC Family ID: CGCFAM_08846
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_126954 | k141_126954_4 | 3122 | 6415 | - | 3.A.5.1.1 |
| pfam | k141_126954 | k141_126954_5 | 6710 | 8299 | - | Phosphodiest |
| pfam | k141_126954 | k141_126954_6 | 8296 | 9543 | - | Lnb_N |
| CAZyme | k141_126954 | k141_126954_7 | 9876 | 12239 | - | GH3 |
| pfam | k141_126954 | k141_126954_8 | 12287 | 13636 | - | AAA_14 | DUF4143 |
| CAZyme | k141_126954 | k141_126954_9 | 14201 | 16801 | + | GH3 |
Gene ID: k141_126954_4
Type: TC
Location: 3122 - 6415 (-)
Type: TC
Location: 3122 - 6415 (-)
Gene ID: k141_126954_5
Type: pfam
Location: 6710 - 8299 (-)
Type: pfam
Location: 6710 - 8299 (-)
Gene ID: k141_126954_6
Type: pfam
Location: 8296 - 9543 (-)
Type: pfam
Location: 8296 - 9543 (-)
Gene ID: k141_126954_7
Type: CAZyme
Location: 9876 - 12239 (-)
Type: CAZyme
Location: 9876 - 12239 (-)
Gene ID: k141_126954_8
Type: pfam
Location: 12287 - 13636 (-)
Type: pfam
Location: 12287 - 13636 (-)
Gene ID: k141_126954_9
Type: CAZyme
Location: 14201 - 16801 (+)
Type: CAZyme
Location: 14201 - 16801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.