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Cluster: CGMR064757_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_218872 k141_218872_21 30955 32391 - PL1_2
CAZyme k141_218872 k141_218872_22 32870 34174 - GH105
CAZyme k141_218872 k141_218872_23 34215 35741 - GH28
CAZyme k141_218872 k141_218872_24 35757 38516 - GH106
CAZyme k141_218872 k141_218872_25 38530 39921 - CE20
TF k141_218872 k141_218872_26 40164 41180 + HTH_AraC | HTH_AraC
pfam k141_218872 k141_218872_27 42091 43773 - SusD_RagB | SusD-like_3
TC k141_218872 k141_218872_28 43782 46922 - 1.B.14.6.1
Gene ID: k141_218872_21
Type: CAZyme
Location: 30955 - 32391 (-)
Gene ID: k141_218872_22
Type: CAZyme
Location: 32870 - 34174 (-)
Gene ID: k141_218872_23
Type: CAZyme
Location: 34215 - 35741 (-)
Gene ID: k141_218872_24
Type: CAZyme
Location: 35757 - 38516 (-)
Gene ID: k141_218872_25
Type: CAZyme
Location: 38530 - 39921 (-)
Gene ID: k141_218872_26
Type: TF
Location: 40164 - 41180 (+)
Gene ID: k141_218872_27
Type: pfam
Location: 42091 - 43773 (-)
Gene ID: k141_218872_28
Type: TC
Location: 43782 - 46922 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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