Cluster: CGMR064757_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR064757
- CGC Family ID: CGCFAM_00552
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_33487 | k141_33487_64 | 80842 | 82647 | + | GH141 |
| CAZyme | k141_33487 | k141_33487_65 | 82669 | 84912 | + | GH31_3 |
| NULL(UNKNOWN) | k141_33487 | k141_33487_66 | 85059 | 86123 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_33487 | k141_33487_67 | 86147 | 86785 | + | B12-binding | B12-binding_2 |
| TC | k141_33487 | k141_33487_68 | 86810 | 88378 | + | 2.A.21.3.19 |
Gene ID: k141_33487_64
Type: CAZyme
Location: 80842 - 82647 (+)
Type: CAZyme
Location: 80842 - 82647 (+)
Gene ID: k141_33487_65
Type: CAZyme
Location: 82669 - 84912 (+)
Type: CAZyme
Location: 82669 - 84912 (+)
Gene ID: k141_33487_66
Type:
Location: 85059 - 86123 (+)
Type:
Location: 85059 - 86123 (+)
Gene ID: k141_33487_67
Type: STP
Location: 86147 - 86785 (+)
Type: STP
Location: 86147 - 86785 (+)
Gene ID: k141_33487_68
Type: TC
Location: 86810 - 88378 (+)
Type: TC
Location: 86810 - 88378 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp900765575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.