Cluster: CGMR064595_CGC6
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR064595
- CGC Family ID: CGCFAM_01025
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_266349 | k141_266349_87 | 87509 | 88135 | - | GH73 |
| TC | k141_266349 | k141_266349_88 | 88137 | 88754 | - | 2.A.87.2.1 |
| pfam | k141_266349 | k141_266349_89 | 88971 | 89429 | - | SprT-like | Zn_ribbon_SprT |
| CAZyme | k141_266349 | k141_266349_90 | 89429 | 90130 | - | GT32 |
| TC | k141_266349 | k141_266349_91 | 90127 | 91563 | - | 2.A.66.2.16 |
| pfam | k141_266349 | k141_266349_92 | 91575 | 92723 | - | Glyphos_transf |
| TF | k141_266349 | k141_266349_93 | 92947 | 93753 | + | HTH_3 |
| TC | k141_266349 | k141_266349_94 | 93855 | 95423 | + | 3.A.1.106.15 |
| TC | k141_266349 | k141_266349_95 | 95508 | 98189 | - | 3.A.3.2.28 |
| pfam | k141_266349 | k141_266349_96 | 98358 | 99191 | - | NAD_synthase |
| pfam | k141_266349 | k141_266349_97 | 99193 | 100665 | - | QRPTase_N | NAPRTase | NAPRTase_N | NAPRTase_C |
| CAZyme | k141_266349 | k141_266349_98 | 100850 | 102781 | - | GT2 |
| CAZyme | k141_266349 | k141_266349_99 | 102781 | 103881 | - | GT4 |
| CAZyme | k141_266349 | k141_266349_100 | 103901 | 104629 | - | GT26 |
Gene ID: k141_266349_87
Type: CAZyme
Location: 87509 - 88135 (-)
Type: CAZyme
Location: 87509 - 88135 (-)
Gene ID: k141_266349_88
Type: TC
Location: 88137 - 88754 (-)
Type: TC
Location: 88137 - 88754 (-)
Gene ID: k141_266349_89
Type: pfam
Location: 88971 - 89429 (-)
Type: pfam
Location: 88971 - 89429 (-)
Gene ID: k141_266349_90
Type: CAZyme
Location: 89429 - 90130 (-)
Type: CAZyme
Location: 89429 - 90130 (-)
Gene ID: k141_266349_91
Type: TC
Location: 90127 - 91563 (-)
Type: TC
Location: 90127 - 91563 (-)
Gene ID: k141_266349_92
Type: pfam
Location: 91575 - 92723 (-)
Type: pfam
Location: 91575 - 92723 (-)
Gene ID: k141_266349_93
Type: TF
Location: 92947 - 93753 (+)
Type: TF
Location: 92947 - 93753 (+)
Gene ID: k141_266349_94
Type: TC
Location: 93855 - 95423 (+)
Type: TC
Location: 93855 - 95423 (+)
Gene ID: k141_266349_95
Type: TC
Location: 95508 - 98189 (-)
Type: TC
Location: 95508 - 98189 (-)
Gene ID: k141_266349_96
Type: pfam
Location: 98358 - 99191 (-)
Type: pfam
Location: 98358 - 99191 (-)
Gene ID: k141_266349_97
Type: pfam
Location: 99193 - 100665 (-)
Type: pfam
Location: 99193 - 100665 (-)
Gene ID: k141_266349_98
Type: CAZyme
Location: 100850 - 102781 (-)
Type: CAZyme
Location: 100850 - 102781 (-)
Gene ID: k141_266349_99
Type: CAZyme
Location: 102781 - 103881 (-)
Type: CAZyme
Location: 102781 - 103881 (-)
Gene ID: k141_266349_100
Type: CAZyme
Location: 103901 - 104629 (-)
Type: CAZyme
Location: 103901 - 104629 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus gasseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.