Cluster: CGMR064595_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR064595
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_119347 | k141_119347_44 | 44767 | 46056 | + | 4.A.3.2.3 |
| NULL(UNKNOWN) | k141_119347 | k141_119347_45 | 46058 | 47026 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_119347 | k141_119347_46 | 47040 | 48515 | + | GH1 |
| TF | k141_119347 | k141_119347_47 | 48829 | 49278 | - | HTH_6 |
| pfam | k141_119347 | k141_119347_48 | 49313 | 49969 | + | MgsA_C |
| TC | k141_119347 | k141_119347_49 | 50009 | 51331 | + | 4.A.3.2.6 |
Gene ID: k141_119347_44
Type: TC
Location: 44767 - 46056 (+)
Type: TC
Location: 44767 - 46056 (+)
Gene ID: k141_119347_45
Type:
Location: 46058 - 47026 (+)
Type:
Location: 46058 - 47026 (+)
Gene ID: k141_119347_46
Type: CAZyme
Location: 47040 - 48515 (+)
Type: CAZyme
Location: 47040 - 48515 (+)
Gene ID: k141_119347_47
Type: TF
Location: 48829 - 49278 (-)
Type: TF
Location: 48829 - 49278 (-)
Gene ID: k141_119347_48
Type: pfam
Location: 49313 - 49969 (+)
Type: pfam
Location: 49313 - 49969 (+)
Gene ID: k141_119347_49
Type: TC
Location: 50009 - 51331 (+)
Type: TC
Location: 50009 - 51331 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus gasseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.