Cluster: CGMR064595_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: CGMR064595
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_275502 | k141_275502_136 | 117587 | 119014 | - | GH1 |
| TC | k141_275502 | k141_275502_137 | 119030 | 120727 | - | 4.A.3.1.3 |
| TC | k141_275502 | k141_275502_138 | 120779 | 121135 | - | 4.A.3.1.3 |
| pfam | k141_275502 | k141_275502_139 | 121148 | 121987 | - | PRD | PRD | CAT_RBD |
| NULL(UNKNOWN) | k141_275502 | k141_275502_140 | 122292 | 122540 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_275502 | k141_275502_141 | 122577 | 123995 | - | 4.A.5.1.6 |
Gene ID: k141_275502_136
Type: CAZyme
Location: 117587 - 119014 (-)
Type: CAZyme
Location: 117587 - 119014 (-)
Gene ID: k141_275502_137
Type: TC
Location: 119030 - 120727 (-)
Type: TC
Location: 119030 - 120727 (-)
Gene ID: k141_275502_138
Type: TC
Location: 120779 - 121135 (-)
Type: TC
Location: 120779 - 121135 (-)
Gene ID: k141_275502_139
Type: pfam
Location: 121148 - 121987 (-)
Type: pfam
Location: 121148 - 121987 (-)
Gene ID: k141_275502_140
Type:
Location: 122292 - 122540 (-)
Type:
Location: 122292 - 122540 (-)
Gene ID: k141_275502_141
Type: TC
Location: 122577 - 123995 (-)
Type: TC
Location: 122577 - 123995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus gasseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.