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Cluster: CGMR064595_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_275502 k141_275502_94 78602 79120 - 4.A.1.2.6
TC k141_275502 k141_275502_95 79175 80566 - 4.A.1.2.6
TF k141_275502 k141_275502_96 80724 81449 + GntR
CAZyme k141_275502 k141_275502_97 81464 83122 + GH13_29
NULL(UNKNOWN) k141_275502 k141_275502_98 83220 83552 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_275502 k141_275502_99 83599 84249 - 3.A.1.3.10
TC k141_275502 k141_275502_100 84263 84901 - 3.A.1.3.25
TC k141_275502 k141_275502_101 84898 85722 - 3.A.1.3.16
TC k141_275502 k141_275502_102 85724 86473 - 3.A.1.3.26
TC k141_275502 k141_275502_103 86923 87744 - 3.A.1.3.16
TC k141_275502 k141_275502_104 87794 89332 - 3.A.1.135.8
NULL(UNKNOWN) k141_275502 k141_275502_105 89401 89550 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_275502 k141_275502_106 89543 91276 - 3.A.1.135.3
TF k141_275502 k141_275502_107 91277 91717 - MarR
pfam k141_275502 k141_275502_108 91806 92657 - DUF915
TC k141_275502 k141_275502_109 92752 93984 - 2.A.1.15.9
TC k141_275502 k141_275502_110 94135 95628 - 2.A.17.1.6
pfam k141_275502 k141_275502_111 95771 95983 - Glyco_hydro_31_3rd
pfam k141_275502 k141_275502_112 95980 96285 - Glyco_hydro_31_2nd
CAZyme k141_275502 k141_275502_113 96399 97739 - GH31_5
TF k141_275502 k141_275502_114 97751 98734 - LacI
CAZyme k141_275502 k141_275502_115 98727 100394 - GH13_31
TC k141_275502 k141_275502_116 100387 100818 - 4.A.6.1.19
TC k141_275502 k141_275502_117 100831 101664 - 4.A.6.1.13
TC k141_275502 k141_275502_118 101657 102454 - 4.A.6.1.13
TC k141_275502 k141_275502_119 102457 102951 - 4.A.6.1.3
Gene ID: k141_275502_94
Type: TC
Location: 78602 - 79120 (-)
Gene ID: k141_275502_95
Type: TC
Location: 79175 - 80566 (-)
Gene ID: k141_275502_96
Type: TF
Location: 80724 - 81449 (+)
Gene ID: k141_275502_97
Type: CAZyme
Location: 81464 - 83122 (+)
Gene ID: k141_275502_98
Type:
Location: 83220 - 83552 (+)
Gene ID: k141_275502_99
Type: TC
Location: 83599 - 84249 (-)
Gene ID: k141_275502_100
Type: TC
Location: 84263 - 84901 (-)
Gene ID: k141_275502_101
Type: TC
Location: 84898 - 85722 (-)
Gene ID: k141_275502_102
Type: TC
Location: 85724 - 86473 (-)
Gene ID: k141_275502_103
Type: TC
Location: 86923 - 87744 (-)
Gene ID: k141_275502_104
Type: TC
Location: 87794 - 89332 (-)
Gene ID: k141_275502_105
Type:
Location: 89401 - 89550 (-)
Gene ID: k141_275502_106
Type: TC
Location: 89543 - 91276 (-)
Gene ID: k141_275502_107
Type: TF
Location: 91277 - 91717 (-)
Gene ID: k141_275502_108
Type: pfam
Location: 91806 - 92657 (-)
Gene ID: k141_275502_109
Type: TC
Location: 92752 - 93984 (-)
Gene ID: k141_275502_110
Type: TC
Location: 94135 - 95628 (-)
Gene ID: k141_275502_111
Type: pfam
Location: 95771 - 95983 (-)
Gene ID: k141_275502_112
Type: pfam
Location: 95980 - 96285 (-)
Gene ID: k141_275502_113
Type: CAZyme
Location: 96399 - 97739 (-)
Gene ID: k141_275502_114
Type: TF
Location: 97751 - 98734 (-)
Gene ID: k141_275502_115
Type: CAZyme
Location: 98727 - 100394 (-)
Gene ID: k141_275502_116
Type: TC
Location: 100387 - 100818 (-)
Gene ID: k141_275502_117
Type: TC
Location: 100831 - 101664 (-)
Gene ID: k141_275502_118
Type: TC
Location: 101657 - 102454 (-)
Gene ID: k141_275502_119
Type: TC
Location: 102457 - 102951 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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