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Cluster: CGMR064595_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_266349 k141_266349_308 300591 301970 + GH1
TC k141_266349 k141_266349_309 301970 303400 + 4.A.3.2.8
TC k141_266349 k141_266349_310 303547 303870 + 4.A.3.2.4
NULL(UNKNOWN) k141_266349 k141_266349_311 303876 304064 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_266349 k141_266349_312 304213 304539 + 4.A.3.2.4
TF k141_266349 k141_266349_313 304539 305264 + GntR
CAZyme k141_266349 k141_266349_314 305331 306824 + GH1
pfam k141_266349 k141_266349_315 306893 307300 + DUF3284
TF k141_266349 k141_266349_316 307345 308043 - GntR
TC k141_266349 k141_266349_317 308119 309471 - 4.A.3.2.2
NULL(UNKNOWN) k141_266349 k141_266349_318 309494 309991 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_266349 k141_266349_319 310189 311637 + GH1
Gene ID: k141_266349_308
Type: CAZyme
Location: 300591 - 301970 (+)
Gene ID: k141_266349_309
Type: TC
Location: 301970 - 303400 (+)
Gene ID: k141_266349_310
Type: TC
Location: 303547 - 303870 (+)
Gene ID: k141_266349_311
Type:
Location: 303876 - 304064 (+)
Gene ID: k141_266349_312
Type: TC
Location: 304213 - 304539 (+)
Gene ID: k141_266349_313
Type: TF
Location: 304539 - 305264 (+)
Gene ID: k141_266349_314
Type: CAZyme
Location: 305331 - 306824 (+)
Gene ID: k141_266349_315
Type: pfam
Location: 306893 - 307300 (+)
Gene ID: k141_266349_316
Type: TF
Location: 307345 - 308043 (-)
Gene ID: k141_266349_317
Type: TC
Location: 308119 - 309471 (-)
Gene ID: k141_266349_318
Type:
Location: 309494 - 309991 (-)
Gene ID: k141_266349_319
Type: CAZyme
Location: 310189 - 311637 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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