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Cluster: CGMR064547_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_5889 k141_5889_51 55088 56437 - GT2
TC k141_5889 k141_5889_52 56450 57673 - 3.A.1.103.5
pfam k141_5889 k141_5889_53 57673 58479 - ABC2_membrane
CAZyme k141_5889 k141_5889_54 58479 59420 - GT2
CAZyme k141_5889 k141_5889_55 59417 60565 - GT4
CAZyme k141_5889 k141_5889_56 60684 61460 - GT2
pfam k141_5889 k141_5889_57 61453 61806 - DUF2304
CAZyme k141_5889 k141_5889_58 61806 62510 - GT2
CAZyme k141_5889 k141_5889_59 62552 63544 - GT8
NULL(UNKNOWN) k141_5889 k141_5889_60 63544 64869 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_5889 k141_5889_61 65236 66087 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme k141_5889 k141_5889_62 66149 67075 - GT2
Gene ID: k141_5889_51
Type: CAZyme
Location: 55088 - 56437 (-)
Gene ID: k141_5889_52
Type: TC
Location: 56450 - 57673 (-)
Gene ID: k141_5889_53
Type: pfam
Location: 57673 - 58479 (-)
Gene ID: k141_5889_54
Type: CAZyme
Location: 58479 - 59420 (-)
Gene ID: k141_5889_55
Type: CAZyme
Location: 59417 - 60565 (-)
Gene ID: k141_5889_56
Type: CAZyme
Location: 60684 - 61460 (-)
Gene ID: k141_5889_57
Type: pfam
Location: 61453 - 61806 (-)
Gene ID: k141_5889_58
Type: CAZyme
Location: 61806 - 62510 (-)
Gene ID: k141_5889_59
Type: CAZyme
Location: 62552 - 63544 (-)
Gene ID: k141_5889_60
Type:
Location: 63544 - 64869 (-)
Gene ID: k141_5889_61
Type: pfam
Location: 65236 - 66087 (-)
Gene ID: k141_5889_62
Type: CAZyme
Location: 66149 - 67075 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_5889_61 vegan > omnivore 1.07281 0.04105

🧭 Explore Read Mapping of CGC

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