Cluster: CGMR064547_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR064547
- CGC Family ID: CGCFAM_06439
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_18320 | k141_18320_1 | 183 | 1529 | - | 4.A.3.2.3 |
| NULL(UNKNOWN) | k141_18320 | k141_18320_2 | 1589 | 2095 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_18320 | k141_18320_3 | 2125 | 2439 | - | 4.A.3.2.1 |
| TF | k141_18320 | k141_18320_4 | 2449 | 4425 | - | HTH_11 | Mga |
| pfam | k141_18320 | k141_18320_5 | 4589 | 4903 | - | PTS_IIB |
| TC | k141_18320 | k141_18320_6 | 5035 | 5274 | - | 2.A.123.2.3 |
| CAZyme | k141_18320 | k141_18320_7 | 5328 | 6764 | - | GH1 |
Gene ID: k141_18320_1
Type: TC
Location: 183 - 1529 (-)
Type: TC
Location: 183 - 1529 (-)
Gene ID: k141_18320_2
Type:
Location: 1589 - 2095 (-)
Type:
Location: 1589 - 2095 (-)
Gene ID: k141_18320_3
Type: TC
Location: 2125 - 2439 (-)
Type: TC
Location: 2125 - 2439 (-)
Gene ID: k141_18320_4
Type: TF
Location: 2449 - 4425 (-)
Type: TF
Location: 2449 - 4425 (-)
Gene ID: k141_18320_5
Type: pfam
Location: 4589 - 4903 (-)
Type: pfam
Location: 4589 - 4903 (-)
Gene ID: k141_18320_6
Type: TC
Location: 5035 - 5274 (-)
Type: TC
Location: 5035 - 5274 (-)
Gene ID: k141_18320_7
Type: CAZyme
Location: 5328 - 6764 (-)
Type: CAZyme
Location: 5328 - 6764 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus vestibularis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_18320_2 | vegan > omnivore | 2.32936 | 0.04105 |
| k141_18320_6 | vegan > omnivore | 2.61562 | 0.04105 |