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Cluster: CGMR064282_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_33371 k141_33371_3 2324 3775 + 2.A.25.1.9
pfam k141_33371 k141_33371_4 3813 4133 + DUF1904
TC k141_33371 k141_33371_5 4185 4760 - 2.A.51.1.6
TC k141_33371 k141_33371_6 4757 5332 - 2.A.51.1.6
pfam k141_33371 k141_33371_7 5590 7224 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC k141_33371 k141_33371_8 7221 7949 + 3.A.1.122.2
TC k141_33371 k141_33371_9 7936 9243 + 3.A.1.122.2
TF k141_33371 k141_33371_10 9338 10048 + Trans_reg_C
STP k141_33371 k141_33371_11 10026 11606 + HATPase_c | HisKA
TC k141_33371 k141_33371_12 12468 12968 - 4.A.6.1.19
TF k141_33371 k141_33371_13 13004 13705 + GntR
pfam k141_33371 k141_33371_14 13957 14625 - PIN7
CAZyme k141_33371 k141_33371_15 14674 16782 - GH13_11
Gene ID: k141_33371_3
Type: TC
Location: 2324 - 3775 (+)
Gene ID: k141_33371_4
Type: pfam
Location: 3813 - 4133 (+)
Gene ID: k141_33371_5
Type: TC
Location: 4185 - 4760 (-)
Gene ID: k141_33371_6
Type: TC
Location: 4757 - 5332 (-)
Gene ID: k141_33371_7
Type: pfam
Location: 5590 - 7224 (+)
Gene ID: k141_33371_8
Type: TC
Location: 7221 - 7949 (+)
Gene ID: k141_33371_9
Type: TC
Location: 7936 - 9243 (+)
Gene ID: k141_33371_10
Type: TF
Location: 9338 - 10048 (+)
Gene ID: k141_33371_11
Type: STP
Location: 10026 - 11606 (+)
Gene ID: k141_33371_12
Type: TC
Location: 12468 - 12968 (-)
Gene ID: k141_33371_13
Type: TF
Location: 13004 - 13705 (+)
Gene ID: k141_33371_14
Type: pfam
Location: 13957 - 14625 (-)
Gene ID: k141_33371_15
Type: CAZyme
Location: 14674 - 16782 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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