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Cluster: CGMR064282_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_148550 k141_148550_1 46 1416 - 2.A.66.1.13
pfam k141_148550 k141_148550_2 1441 2100 - Pentapeptide | Pentapeptide | Pentapeptide | Pentapeptide | Pentapeptide_4
CAZyme k141_148550 k141_148550_3 2318 9103 - GH33 | GH33
NULL(UNKNOWN) k141_148550 k141_148550_4 9477 10163 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_148550 k141_148550_5 10166 10729 + 2.A.107.1.2
TF k141_148550 k141_148550_6 10826 11494 + Crp
pfam k141_148550 k141_148550_7 11636 11947 + Thioredoxin | Thioredoxin_2 | Thioredoxin_3 | TraF | Thioredoxin_9
TC k141_148550 k141_148550_8 12056 13255 - 2.A.86.1.8
CAZyme k141_148550 k141_148550_9 13367 14092 - GH25
Gene ID: k141_148550_1
Type: TC
Location: 46 - 1416 (-)
Gene ID: k141_148550_2
Type: pfam
Location: 1441 - 2100 (-)
Gene ID: k141_148550_3
Type: CAZyme
Location: 2318 - 9103 (-)
Gene ID: k141_148550_4
Type:
Location: 9477 - 10163 (-)
Gene ID: k141_148550_5
Type: TC
Location: 10166 - 10729 (+)
Gene ID: k141_148550_6
Type: TF
Location: 10826 - 11494 (+)
Gene ID: k141_148550_7
Type: pfam
Location: 11636 - 11947 (+)
Gene ID: k141_148550_8
Type: TC
Location: 12056 - 13255 (-)
Gene ID: k141_148550_9
Type: CAZyme
Location: 13367 - 14092 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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