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Cluster: CGMR064282_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_374814 k141_374814_15 13992 15110 + GT4
CAZyme k141_374814 k141_374814_16 15130 16110 + GT2
pfam k141_374814 k141_374814_17 16135 17370 + Glyco_trans_1_4
CAZyme k141_374814 k141_374814_18 17374 18639 + GT4
CAZyme k141_374814 k141_374814_19 18636 19586 + GT2
CAZyme k141_374814 k141_374814_20 19583 20596 + GT2
CAZyme k141_374814 k141_374814_21 20627 21628 + GT2
CAZyme k141_374814 k141_374814_22 21657 22664 + GT2
CAZyme k141_374814 k141_374814_23 22668 24863 + GT2 | GT4
CAZyme k141_374814 k141_374814_24 24881 25930 + GT2
STP k141_374814 k141_374814_25 26007 27116 + Aminotran_1_2
CAZyme k141_374814 k141_374814_26 27126 28184 + GT2
pfam k141_374814 k141_374814_27 28204 29151 + ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
TC k141_374814 k141_374814_28 29186 30052 + 3.A.1.103.5
TC k141_374814 k141_374814_29 30068 31369 + 3.A.1.103.5
CAZyme k141_374814 k141_374814_30 31372 32367 + GT100
Gene ID: k141_374814_15
Type: CAZyme
Location: 13992 - 15110 (+)
Gene ID: k141_374814_16
Type: CAZyme
Location: 15130 - 16110 (+)
Gene ID: k141_374814_17
Type: pfam
Location: 16135 - 17370 (+)
Gene ID: k141_374814_18
Type: CAZyme
Location: 17374 - 18639 (+)
Gene ID: k141_374814_19
Type: CAZyme
Location: 18636 - 19586 (+)
Gene ID: k141_374814_20
Type: CAZyme
Location: 19583 - 20596 (+)
Gene ID: k141_374814_21
Type: CAZyme
Location: 20627 - 21628 (+)
Gene ID: k141_374814_22
Type: CAZyme
Location: 21657 - 22664 (+)
Gene ID: k141_374814_23
Type: CAZyme
Location: 22668 - 24863 (+)
Gene ID: k141_374814_24
Type: CAZyme
Location: 24881 - 25930 (+)
Gene ID: k141_374814_25
Type: STP
Location: 26007 - 27116 (+)
Gene ID: k141_374814_26
Type: CAZyme
Location: 27126 - 28184 (+)
Gene ID: k141_374814_27
Type: pfam
Location: 28204 - 29151 (+)
Gene ID: k141_374814_28
Type: TC
Location: 29186 - 30052 (+)
Gene ID: k141_374814_29
Type: TC
Location: 30068 - 31369 (+)
Gene ID: k141_374814_30
Type: CAZyme
Location: 31372 - 32367 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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