Cluster: CGMR064170_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR064170
- CGC Family ID: CGCFAM_02619
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_177337 | k141_177337_4 | 2139 | 4484 | - | GH3 |
| TC | k141_177337 | k141_177337_5 | 4592 | 6529 | - | 1.B.52.2.2 |
| TC | k141_177337 | k141_177337_6 | 6721 | 7563 | + | 3.A.1.12.3 |
| TC | k141_177337 | k141_177337_7 | 7560 | 8240 | + | 3.A.1.12.10 |
| TC | k141_177337 | k141_177337_8 | 8237 | 8938 | + | 3.A.1.12.14 |
| pfam | k141_177337 | k141_177337_9 | 8935 | 9879 | + | OpuAC |
| NULL(UNKNOWN) | k141_177337 | k141_177337_10 | 10001 | 10726 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_177337 | k141_177337_11 | 10872 | 11462 | + | 3.D.1.8.1 |
Gene ID: k141_177337_4
Type: CAZyme
Location: 2139 - 4484 (-)
Type: CAZyme
Location: 2139 - 4484 (-)
Gene ID: k141_177337_5
Type: TC
Location: 4592 - 6529 (-)
Type: TC
Location: 4592 - 6529 (-)
Gene ID: k141_177337_6
Type: TC
Location: 6721 - 7563 (+)
Type: TC
Location: 6721 - 7563 (+)
Gene ID: k141_177337_7
Type: TC
Location: 7560 - 8240 (+)
Type: TC
Location: 7560 - 8240 (+)
Gene ID: k141_177337_8
Type: TC
Location: 8237 - 8938 (+)
Type: TC
Location: 8237 - 8938 (+)
Gene ID: k141_177337_9
Type: pfam
Location: 8935 - 9879 (+)
Type: pfam
Location: 8935 - 9879 (+)
Gene ID: k141_177337_10
Type:
Location: 10001 - 10726 (-)
Type:
Location: 10001 - 10726 (-)
Gene ID: k141_177337_11
Type: TC
Location: 10872 - 11462 (+)
Type: TC
Location: 10872 - 11462 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
JB111
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.