Cluster: CGMR064170_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR064170
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_172590 | k141_172590_3 | 2285 | 3157 | + | GT2 |
| pfam | k141_172590 | k141_172590_4 | 3278 | 4270 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| sulfatase | k141_172590 | k141_172590_5 | 4576 | 6984 | + | S1_6 |
| TC | k141_172590 | k141_172590_6 | 7389 | 8243 | + | 3.A.1.103.6 |
| TC | k141_172590 | k141_172590_7 | 8240 | 9532 | + | 3.A.1.103.5 |
| CAZyme | k141_172590 | k141_172590_8 | 9529 | 10899 | + | GT4 |
Gene ID: k141_172590_3
Type: CAZyme
Location: 2285 - 3157 (+)
Type: CAZyme
Location: 2285 - 3157 (+)
Gene ID: k141_172590_4
Type: pfam
Location: 3278 - 4270 (-)
Type: pfam
Location: 3278 - 4270 (-)
Gene ID: k141_172590_5
Type: sulfatase
Location: 4576 - 6984 (+)
Type: sulfatase
Location: 4576 - 6984 (+)
Gene ID: k141_172590_6
Type: TC
Location: 7389 - 8243 (+)
Type: TC
Location: 7389 - 8243 (+)
Gene ID: k141_172590_7
Type: TC
Location: 8240 - 9532 (+)
Type: TC
Location: 8240 - 9532 (+)
Gene ID: k141_172590_8
Type: CAZyme
Location: 9529 - 10899 (+)
Type: CAZyme
Location: 9529 - 10899 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
JB111
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.