Cluster: CGMR064170_CGC14
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR064170
- CGC Family ID: CGCFAM_07800
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_275817 | k141_275817_1 | 3 | 974 | + | 2.A.7.7.2 |
| pfam | k141_275817 | k141_275817_2 | 1033 | 2034 | - | polyprenyl_synt |
| TC | k141_275817 | k141_275817_3 | 2031 | 3647 | - | 3.D.1.5.1 |
| TC | k141_275817 | k141_275817_4 | 3644 | 5284 | - | 3.D.1.5.1 |
| TC | k141_275817 | k141_275817_5 | 5307 | 7262 | - | 3.D.1.3.1 |
| TC | k141_275817 | k141_275817_6 | 7277 | 7576 | - | 3.D.1.3.1 |
| pfam | k141_275817 | k141_275817_7 | 7573 | 8658 | - | Oxidored_q3 |
| TC | k141_275817 | k141_275817_8 | 8655 | 9461 | - | 3.D.1.3.1 |
| TC | k141_275817 | k141_275817_9 | 9454 | 10911 | - | 3.D.1.5.1 |
| TC | k141_275817 | k141_275817_10 | 10908 | 13601 | - | 3.D.1.6.1 |
| TC | k141_275817 | k141_275817_11 | 13598 | 14923 | - | 3.D.1.2.1 |
| pfam | k141_275817 | k141_275817_12 | 14920 | 15870 | - | 2Fe-2S_thioredx |
| TC | k141_275817 | k141_275817_13 | 15870 | 17216 | - | 3.D.1.3.1 |
| TC | k141_275817 | k141_275817_14 | 17216 | 17980 | - | 3.D.1.3.1 |
| TC | k141_275817 | k141_275817_15 | 17977 | 18531 | - | 3.D.1.3.1 |
| TC | k141_275817 | k141_275817_16 | 18574 | 18936 | - | 3.D.1.2.1 |
| pfam | k141_275817 | k141_275817_17 | 19025 | 20326 | - | FAD_binding_2 | DAO | FAD_binding_3 | Thi4 | Pyr_redox_2 | NAD_binding_8 |
| CAZyme | k141_275817 | k141_275817_18 | 20568 | 22445 | + | GH77 |
| pfam | k141_275817 | k141_275817_19 | 22442 | 23896 | + | Chorismate_bind |
| TC | k141_275817 | k141_275817_20 | 23988 | 25427 | - | 9.B.160.1.10 |
Gene ID: k141_275817_1
Type: TC
Location: 3 - 974 (+)
Type: TC
Location: 3 - 974 (+)
Gene ID: k141_275817_2
Type: pfam
Location: 1033 - 2034 (-)
Type: pfam
Location: 1033 - 2034 (-)
Gene ID: k141_275817_3
Type: TC
Location: 2031 - 3647 (-)
Type: TC
Location: 2031 - 3647 (-)
Gene ID: k141_275817_4
Type: TC
Location: 3644 - 5284 (-)
Type: TC
Location: 3644 - 5284 (-)
Gene ID: k141_275817_5
Type: TC
Location: 5307 - 7262 (-)
Type: TC
Location: 5307 - 7262 (-)
Gene ID: k141_275817_6
Type: TC
Location: 7277 - 7576 (-)
Type: TC
Location: 7277 - 7576 (-)
Gene ID: k141_275817_7
Type: pfam
Location: 7573 - 8658 (-)
Type: pfam
Location: 7573 - 8658 (-)
Gene ID: k141_275817_8
Type: TC
Location: 8655 - 9461 (-)
Type: TC
Location: 8655 - 9461 (-)
Gene ID: k141_275817_9
Type: TC
Location: 9454 - 10911 (-)
Type: TC
Location: 9454 - 10911 (-)
Gene ID: k141_275817_10
Type: TC
Location: 10908 - 13601 (-)
Type: TC
Location: 10908 - 13601 (-)
Gene ID: k141_275817_11
Type: TC
Location: 13598 - 14923 (-)
Type: TC
Location: 13598 - 14923 (-)
Gene ID: k141_275817_12
Type: pfam
Location: 14920 - 15870 (-)
Type: pfam
Location: 14920 - 15870 (-)
Gene ID: k141_275817_13
Type: TC
Location: 15870 - 17216 (-)
Type: TC
Location: 15870 - 17216 (-)
Gene ID: k141_275817_14
Type: TC
Location: 17216 - 17980 (-)
Type: TC
Location: 17216 - 17980 (-)
Gene ID: k141_275817_15
Type: TC
Location: 17977 - 18531 (-)
Type: TC
Location: 17977 - 18531 (-)
Gene ID: k141_275817_16
Type: TC
Location: 18574 - 18936 (-)
Type: TC
Location: 18574 - 18936 (-)
Gene ID: k141_275817_17
Type: pfam
Location: 19025 - 20326 (-)
Type: pfam
Location: 19025 - 20326 (-)
Gene ID: k141_275817_18
Type: CAZyme
Location: 20568 - 22445 (+)
Type: CAZyme
Location: 20568 - 22445 (+)
Gene ID: k141_275817_19
Type: pfam
Location: 22442 - 23896 (+)
Type: pfam
Location: 22442 - 23896 (+)
Gene ID: k141_275817_20
Type: TC
Location: 23988 - 25427 (-)
Type: TC
Location: 23988 - 25427 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
JB111
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.