Cluster: CGMR064164_CGC10
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR064164
- CGC Family ID: CGCFAM_00138
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_370763 | k141_370763_44 | 56421 | 57665 | - | GH171 |
| pfam | k141_370763 | k141_370763_45 | 57800 | 59110 | - | SpoIID |
| pfam | k141_370763 | k141_370763_46 | 59170 | 60171 | - | DUF4922 | DUF4922 |
| CAZyme | k141_370763 | k141_370763_47 | 60351 | 61844 | - | GT2 |
| pfam | k141_370763 | k141_370763_48 | 61941 | 63791 | - | Metallophos | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 |
| NULL(UNKNOWN) | k141_370763 | k141_370763_49 | 63813 | 66866 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_370763 | k141_370763_50 | 66882 | 68342 | - | 2.A.21.3.7 |
| CAZyme | k141_370763 | k141_370763_51 | 68428 | 69609 | - | GH171 |
| peptidase | k141_370763 | k141_370763_52 | 69932 | 71365 | - | S49.UPB |
| STP | k141_370763 | k141_370763_53 | 71560 | 72063 | + | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | k141_370763 | k141_370763_54 | 72166 | 74316 | - | GH29 |
Gene ID: k141_370763_44
Type: CAZyme
Location: 56421 - 57665 (-)
Type: CAZyme
Location: 56421 - 57665 (-)
Gene ID: k141_370763_45
Type: pfam
Location: 57800 - 59110 (-)
Type: pfam
Location: 57800 - 59110 (-)
Gene ID: k141_370763_46
Type: pfam
Location: 59170 - 60171 (-)
Type: pfam
Location: 59170 - 60171 (-)
Gene ID: k141_370763_47
Type: CAZyme
Location: 60351 - 61844 (-)
Type: CAZyme
Location: 60351 - 61844 (-)
Gene ID: k141_370763_48
Type: pfam
Location: 61941 - 63791 (-)
Type: pfam
Location: 61941 - 63791 (-)
Gene ID: k141_370763_49
Type:
Location: 63813 - 66866 (-)
Type:
Location: 63813 - 66866 (-)
Gene ID: k141_370763_50
Type: TC
Location: 66882 - 68342 (-)
Type: TC
Location: 66882 - 68342 (-)
Gene ID: k141_370763_51
Type: CAZyme
Location: 68428 - 69609 (-)
Type: CAZyme
Location: 68428 - 69609 (-)
Gene ID: k141_370763_52
Type: peptidase
Location: 69932 - 71365 (-)
Type: peptidase
Location: 69932 - 71365 (-)
Gene ID: k141_370763_53
Type: STP
Location: 71560 - 72063 (+)
Type: STP
Location: 71560 - 72063 (+)
Gene ID: k141_370763_54
Type: CAZyme
Location: 72166 - 74316 (-)
Type: CAZyme
Location: 72166 - 74316 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
UPXZ01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.