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Cluster: CGMR063819_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12193 k141_12193_3 1456 1998 - 1.B.68.1.1
STP k141_12193 k141_12193_4 2317 2742 + NUDIX
STP k141_12193 k141_12193_5 3027 4166 + Aminotran_1_2
CAZyme k141_12193 k141_12193_6 4169 5152 + GT2
pfam k141_12193 k141_12193_7 5149 7131 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam k141_12193 k141_12193_8 7128 8030 + Polysacc_deac_1
CAZyme k141_12193 k141_12193_9 8027 9682 + GT83
TC k141_12193 k141_12193_10 9679 10014 + 2.A.7.22.1
TC k141_12193 k141_12193_11 10014 10400 + 2.A.7.22.2
Gene ID: k141_12193_3
Type: TC
Location: 1456 - 1998 (-)
Gene ID: k141_12193_4
Type: STP
Location: 2317 - 2742 (+)
Gene ID: k141_12193_5
Type: STP
Location: 3027 - 4166 (+)
Gene ID: k141_12193_6
Type: CAZyme
Location: 4169 - 5152 (+)
Gene ID: k141_12193_7
Type: pfam
Location: 5149 - 7131 (+)
Gene ID: k141_12193_8
Type: pfam
Location: 7128 - 8030 (+)
Gene ID: k141_12193_9
Type: CAZyme
Location: 8027 - 9682 (+)
Gene ID: k141_12193_10
Type: TC
Location: 9679 - 10014 (+)
Gene ID: k141_12193_11
Type: TC
Location: 10014 - 10400 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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