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Cluster: CGMR063819_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_13179 k141_13179_26 27938 30472 + GT51
TC k141_13179 k141_13179_27 30779 33013 + 1.B.14.1.2
TC k141_13179 k141_13179_28 33061 33858 + 3.A.1.14.3
TC k141_13179 k141_13179_29 33858 34748 + 3.A.1.14.3
TC k141_13179 k141_13179_30 34745 36727 + 3.A.1.14.3
pfam k141_13179 k141_13179_31 36818 38098 - Aminotran_3
TC k141_13179 k141_13179_32 38267 39688 + 2.A.49.5.5
pfam k141_13179 k141_13179_33 39770 40114 + Fe-S_biosyn
TC k141_13179 k141_13179_34 40234 40857 - 1.A.62.2.2
TC k141_13179 k141_13179_35 40895 41695 - 3.A.1.13.1
Gene ID: k141_13179_26
Type: CAZyme
Location: 27938 - 30472 (+)
Gene ID: k141_13179_27
Type: TC
Location: 30779 - 33013 (+)
Gene ID: k141_13179_28
Type: TC
Location: 33061 - 33858 (+)
Gene ID: k141_13179_29
Type: TC
Location: 33858 - 34748 (+)
Gene ID: k141_13179_30
Type: TC
Location: 34745 - 36727 (+)
Gene ID: k141_13179_31
Type: pfam
Location: 36818 - 38098 (-)
Gene ID: k141_13179_32
Type: TC
Location: 38267 - 39688 (+)
Gene ID: k141_13179_33
Type: pfam
Location: 39770 - 40114 (+)
Gene ID: k141_13179_34
Type: TC
Location: 40234 - 40857 (-)
Gene ID: k141_13179_35
Type: TC
Location: 40895 - 41695 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_13179_32 vegetarian > vegan 1.02287 0.03709

🧭 Explore Read Mapping of CGC

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