Cluster: CGMR063819_CGC41
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR063819
- CGC Family ID: CGCFAM_03782
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2572 | k141_2572_37 | 36603 | 37436 | + | 2.A.7.31.3 |
| TC | k141_2572 | k141_2572_38 | 37630 | 38814 | + | 2.A.1.2.9 |
| CAZyme | k141_2572 | k141_2572_39 | 38741 | 39802 | - | GH5 |
| TF | k141_2572 | k141_2572_40 | 39902 | 40834 | - | HTH_1 |
| TC | k141_2572 | k141_2572_41 | 41058 | 42395 | + | 2.A.8.1.5 |
Gene ID: k141_2572_37
Type: TC
Location: 36603 - 37436 (+)
Type: TC
Location: 36603 - 37436 (+)
Gene ID: k141_2572_38
Type: TC
Location: 37630 - 38814 (+)
Type: TC
Location: 37630 - 38814 (+)
Gene ID: k141_2572_39
Type: CAZyme
Location: 38741 - 39802 (-)
Type: CAZyme
Location: 38741 - 39802 (-)
Gene ID: k141_2572_40
Type: TF
Location: 39902 - 40834 (-)
Type: TF
Location: 39902 - 40834 (-)
Gene ID: k141_2572_41
Type: TC
Location: 41058 - 42395 (+)
Type: TC
Location: 41058 - 42395 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter youngae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.