Cluster: CGMR063819_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR063819
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_13851 | k141_13851_48 | 49724 | 51376 | - | GH13_29 |
| TC | k141_13851 | k141_13851_49 | 51426 | 52844 | - | 4.A.1.2.4 |
| TF | k141_13851 | k141_13851_50 | 53002 | 53949 | - | LacI |
| TC | k141_13851 | k141_13851_51 | 54367 | 57075 | + | 3.A.3.4.1 |
| TC | k141_13851 | k141_13851_52 | 57453 | 58430 | + | 2.A.56.1.7 |
| pfam | k141_13851 | k141_13851_53 | 58493 | 59002 | + | DctQ |
| TC | k141_13851 | k141_13851_54 | 59033 | 60319 | + | 2.A.56.1.5 |
Gene ID: k141_13851_48
Type: CAZyme
Location: 49724 - 51376 (-)
Type: CAZyme
Location: 49724 - 51376 (-)
Gene ID: k141_13851_49
Type: TC
Location: 51426 - 52844 (-)
Type: TC
Location: 51426 - 52844 (-)
Gene ID: k141_13851_50
Type: TF
Location: 53002 - 53949 (-)
Type: TF
Location: 53002 - 53949 (-)
Gene ID: k141_13851_51
Type: TC
Location: 54367 - 57075 (+)
Type: TC
Location: 54367 - 57075 (+)
Gene ID: k141_13851_52
Type: TC
Location: 57453 - 58430 (+)
Type: TC
Location: 57453 - 58430 (+)
Gene ID: k141_13851_53
Type: pfam
Location: 58493 - 59002 (+)
Type: pfam
Location: 58493 - 59002 (+)
Gene ID: k141_13851_54
Type: TC
Location: 59033 - 60319 (+)
Type: TC
Location: 59033 - 60319 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter youngae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.