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Cluster: CGMR063819_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_21779 k141_21779_4 4860 6230 + 2.A.3.1.3
TC k141_21779 k141_21779_5 6386 7792 + 2.A.2.3.4
CAZyme k141_21779 k141_21779_6 7792 8742 + GH43_26
TC k141_21779 k141_21779_7 8835 9689 - 9.B.125.1.1
pfam k141_21779 k141_21779_8 9686 10249 - Amidase_2
pfam k141_21779 k141_21779_9 10337 11230 + QRPTase_C | QRPTase_N
TC k141_21779 k141_21779_10 11458 11895 + 3.A.15.2.1
TC k141_21779 k141_21779_11 11905 13290 + 3.A.15.2.1
TC k141_21779 k141_21779_12 13280 14482 + 3.A.15.2.1
Gene ID: k141_21779_4
Type: TC
Location: 4860 - 6230 (+)
Gene ID: k141_21779_5
Type: TC
Location: 6386 - 7792 (+)
Gene ID: k141_21779_6
Type: CAZyme
Location: 7792 - 8742 (+)
Gene ID: k141_21779_7
Type: TC
Location: 8835 - 9689 (-)
Gene ID: k141_21779_8
Type: pfam
Location: 9686 - 10249 (-)
Gene ID: k141_21779_9
Type: pfam
Location: 10337 - 11230 (+)
Gene ID: k141_21779_10
Type: TC
Location: 11458 - 11895 (+)
Gene ID: k141_21779_11
Type: TC
Location: 11905 - 13290 (+)
Gene ID: k141_21779_12
Type: TC
Location: 13280 - 14482 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_21779_5 vegetarian > omnivore 1.58559 0.01928
k141_21779_8 omnivore > vegetarian 2.31535 0.02941

🧭 Explore Read Mapping of CGC

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