Cluster: CGMR063490_CGC40
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR063490
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_267015 | k141_267015_6 | 6844 | 8271 | - | 3.D.9.1.1 |
| TC | k141_267015 | k141_267015_7 | 8287 | 9771 | - | 3.D.1.2.1 |
| TC | k141_267015 | k141_267015_8 | 9793 | 11718 | - | 3.D.9.1.1 |
| TC | k141_267015 | k141_267015_9 | 11725 | 12033 | - | 3.D.1.2.1 |
| TC | k141_267015 | k141_267015_10 | 12040 | 12549 | - | 3.D.9.1.1 |
| STP | k141_267015 | k141_267015_11 | 12556 | 13005 | - | Fer4 | Fer4 |
| TC | k141_267015 | k141_267015_12 | 13018 | 14094 | - | 3.D.1.5.1 |
| TC | k141_267015 | k141_267015_13 | 14110 | 15669 | - | 3.D.1.5.1 |
| TC | k141_267015 | k141_267015_14 | 15666 | 16310 | - | 3.D.1.6.1 |
| TC | k141_267015 | k141_267015_15 | 16307 | 16813 | - | 3.D.1.8.1 |
| peptidase | k141_267015 | k141_267015_16 | 17011 | 19050 | - | M49.003 |
| pfam | k141_267015 | k141_267015_17 | 19321 | 19656 | + | YjdM | Zn_Ribbon_YjdM |
| CAZyme | k141_267015 | k141_267015_18 | 19761 | 20582 | - | CE1 |
| TC | k141_267015 | k141_267015_19 | 20672 | 21457 | - | 2.A.5.5.2 |
Gene ID: k141_267015_6
Type: TC
Location: 6844 - 8271 (-)
Type: TC
Location: 6844 - 8271 (-)
Gene ID: k141_267015_7
Type: TC
Location: 8287 - 9771 (-)
Type: TC
Location: 8287 - 9771 (-)
Gene ID: k141_267015_8
Type: TC
Location: 9793 - 11718 (-)
Type: TC
Location: 9793 - 11718 (-)
Gene ID: k141_267015_9
Type: TC
Location: 11725 - 12033 (-)
Type: TC
Location: 11725 - 12033 (-)
Gene ID: k141_267015_10
Type: TC
Location: 12040 - 12549 (-)
Type: TC
Location: 12040 - 12549 (-)
Gene ID: k141_267015_11
Type: STP
Location: 12556 - 13005 (-)
Type: STP
Location: 12556 - 13005 (-)
Gene ID: k141_267015_12
Type: TC
Location: 13018 - 14094 (-)
Type: TC
Location: 13018 - 14094 (-)
Gene ID: k141_267015_13
Type: TC
Location: 14110 - 15669 (-)
Type: TC
Location: 14110 - 15669 (-)
Gene ID: k141_267015_14
Type: TC
Location: 15666 - 16310 (-)
Type: TC
Location: 15666 - 16310 (-)
Gene ID: k141_267015_15
Type: TC
Location: 16307 - 16813 (-)
Type: TC
Location: 16307 - 16813 (-)
Gene ID: k141_267015_16
Type: peptidase
Location: 17011 - 19050 (-)
Type: peptidase
Location: 17011 - 19050 (-)
Gene ID: k141_267015_17
Type: pfam
Location: 19321 - 19656 (+)
Type: pfam
Location: 19321 - 19656 (+)
Gene ID: k141_267015_18
Type: CAZyme
Location: 19761 - 20582 (-)
Type: CAZyme
Location: 19761 - 20582 (-)
Gene ID: k141_267015_19
Type: TC
Location: 20672 - 21457 (-)
Type: TC
Location: 20672 - 21457 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
HGM04593
Species
HGM04593 sp017547585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.