Cluster: CGMR063490_CGC36
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR063490
- CGC Family ID: CGCFAM_04848
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1429140 | k141_1429140_36 | 44094 | 45224 | - | GT4 |
| pfam | k141_1429140 | k141_1429140_37 | 45326 | 46918 | - | DUF4114 |
| NULL(UNKNOWN) | k141_1429140 | k141_1429140_38 | 46946 | 48694 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_1429140 | k141_1429140_39 | 48761 | 49396 | - | 9.B.18.1.1 |
| pfam | k141_1429140 | k141_1429140_40 | 49410 | 50462 | - | NTP_transf_5 |
| CAZyme | k141_1429140 | k141_1429140_41 | 50455 | 51225 | - | GT2 |
| CAZyme | k141_1429140 | k141_1429140_42 | 51575 | 52474 | - | GT2 |
| NULL(UNKNOWN) | k141_1429140 | k141_1429140_43 | 52467 | 53012 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_1429140 | k141_1429140_44 | 53030 | 53926 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1429140 | k141_1429140_45 | 53994 | 54986 | - | GT113 |
| pfam | k141_1429140 | k141_1429140_46 | 54983 | 56110 | - | GLF | NAD_binding_8 |
| CAZyme | k141_1429140 | k141_1429140_47 | 56121 | 57065 | - | GT8 |
| TC | k141_1429140 | k141_1429140_48 | 57067 | 58500 | - | 2.A.66.2.6 |
| NULL(UNKNOWN) | k141_1429140 | k141_1429140_49 | 58617 | 59279 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1429140 | k141_1429140_50 | 59276 | 60265 | - | GT4 |
| pfam | k141_1429140 | k141_1429140_51 | 60790 | 61977 | - | Wzy_C |
| TC | k141_1429140 | k141_1429140_52 | 62044 | 64476 | - | 8.A.3.3.4 |
| TC | k141_1429140 | k141_1429140_53 | 64514 | 65311 | - | 1.B.18.3.3 |
Gene ID: k141_1429140_36
Type: CAZyme
Location: 44094 - 45224 (-)
Type: CAZyme
Location: 44094 - 45224 (-)
Gene ID: k141_1429140_37
Type: pfam
Location: 45326 - 46918 (-)
Type: pfam
Location: 45326 - 46918 (-)
Gene ID: k141_1429140_38
Type:
Location: 46946 - 48694 (-)
Type:
Location: 46946 - 48694 (-)
Gene ID: k141_1429140_39
Type: TC
Location: 48761 - 49396 (-)
Type: TC
Location: 48761 - 49396 (-)
Gene ID: k141_1429140_40
Type: pfam
Location: 49410 - 50462 (-)
Type: pfam
Location: 49410 - 50462 (-)
Gene ID: k141_1429140_41
Type: CAZyme
Location: 50455 - 51225 (-)
Type: CAZyme
Location: 50455 - 51225 (-)
Gene ID: k141_1429140_42
Type: CAZyme
Location: 51575 - 52474 (-)
Type: CAZyme
Location: 51575 - 52474 (-)
Gene ID: k141_1429140_43
Type:
Location: 52467 - 53012 (-)
Type:
Location: 52467 - 53012 (-)
Gene ID: k141_1429140_44
Type:
Location: 53030 - 53926 (-)
Type:
Location: 53030 - 53926 (-)
Gene ID: k141_1429140_45
Type: CAZyme
Location: 53994 - 54986 (-)
Type: CAZyme
Location: 53994 - 54986 (-)
Gene ID: k141_1429140_46
Type: pfam
Location: 54983 - 56110 (-)
Type: pfam
Location: 54983 - 56110 (-)
Gene ID: k141_1429140_47
Type: CAZyme
Location: 56121 - 57065 (-)
Type: CAZyme
Location: 56121 - 57065 (-)
Gene ID: k141_1429140_48
Type: TC
Location: 57067 - 58500 (-)
Type: TC
Location: 57067 - 58500 (-)
Gene ID: k141_1429140_49
Type:
Location: 58617 - 59279 (-)
Type:
Location: 58617 - 59279 (-)
Gene ID: k141_1429140_50
Type: CAZyme
Location: 59276 - 60265 (-)
Type: CAZyme
Location: 59276 - 60265 (-)
Gene ID: k141_1429140_51
Type: pfam
Location: 60790 - 61977 (-)
Type: pfam
Location: 60790 - 61977 (-)
Gene ID: k141_1429140_52
Type: TC
Location: 62044 - 64476 (-)
Type: TC
Location: 62044 - 64476 (-)
Gene ID: k141_1429140_53
Type: TC
Location: 64514 - 65311 (-)
Type: TC
Location: 64514 - 65311 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
HGM04593
Species
HGM04593 sp017547585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.