Cluster: CGMR063490_CGC17
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR063490
- CGC Family ID: CGCFAM_00349
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1555843 | k141_1555843_14 | 13541 | 14953 | + | GH140 |
| CAZyme | k141_1555843 | k141_1555843_15 | 14962 | 16365 | + | GH140 |
| CAZyme | k141_1555843 | k141_1555843_16 | 16490 | 18433 | + | GH97 |
| CAZyme | k141_1555843 | k141_1555843_17 | 18582 | 20558 | - | GH92 |
| NULL(UNKNOWN) | k141_1555843 | k141_1555843_18 | 20757 | 20849 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1555843 | k141_1555843_19 | 20867 | 21916 | - | GT9 |
| pfam | k141_1555843 | k141_1555843_20 | 21897 | 22493 | - | DUF4254 |
| pfam | k141_1555843 | k141_1555843_21 | 22675 | 23718 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| TC | k141_1555843 | k141_1555843_22 | 23861 | 24103 | + | 3.D.1.6.3 |
| pfam | k141_1555843 | k141_1555843_23 | 24144 | 25400 | + | ketoacyl-synt | Ketoacyl-synt_C |
| pfam | k141_1555843 | k141_1555843_24 | 25408 | 26181 | + | dsrm | Ribonuclease_3 | Ribonucleas_3_3 | RM44_endonuclase |
| TC | k141_1555843 | k141_1555843_25 | 26333 | 27310 | + | 2.A.28.2.4 |
Gene ID: k141_1555843_14
Type: CAZyme
Location: 13541 - 14953 (+)
Type: CAZyme
Location: 13541 - 14953 (+)
Gene ID: k141_1555843_15
Type: CAZyme
Location: 14962 - 16365 (+)
Type: CAZyme
Location: 14962 - 16365 (+)
Gene ID: k141_1555843_16
Type: CAZyme
Location: 16490 - 18433 (+)
Type: CAZyme
Location: 16490 - 18433 (+)
Gene ID: k141_1555843_17
Type: CAZyme
Location: 18582 - 20558 (-)
Type: CAZyme
Location: 18582 - 20558 (-)
Gene ID: k141_1555843_18
Type:
Location: 20757 - 20849 (-)
Type:
Location: 20757 - 20849 (-)
Gene ID: k141_1555843_19
Type: CAZyme
Location: 20867 - 21916 (-)
Type: CAZyme
Location: 20867 - 21916 (-)
Gene ID: k141_1555843_20
Type: pfam
Location: 21897 - 22493 (-)
Type: pfam
Location: 21897 - 22493 (-)
Gene ID: k141_1555843_21
Type: pfam
Location: 22675 - 23718 (+)
Type: pfam
Location: 22675 - 23718 (+)
Gene ID: k141_1555843_22
Type: TC
Location: 23861 - 24103 (+)
Type: TC
Location: 23861 - 24103 (+)
Gene ID: k141_1555843_23
Type: pfam
Location: 24144 - 25400 (+)
Type: pfam
Location: 24144 - 25400 (+)
Gene ID: k141_1555843_24
Type: pfam
Location: 25408 - 26181 (+)
Type: pfam
Location: 25408 - 26181 (+)
Gene ID: k141_1555843_25
Type: TC
Location: 26333 - 27310 (+)
Type: TC
Location: 26333 - 27310 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
HGM04593
Species
HGM04593 sp017547585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.