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Cluster: CGMR063490_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1468702 k141_1468702_11 13387 14133 - GH23
pfam k141_1468702 k141_1468702_12 14374 15375 + F_bP_aldolase
pfam k141_1468702 k141_1468702_13 15493 16497 + NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | F420_oxidored | ApbA_C
TC k141_1468702 k141_1468702_14 16544 17500 - 2.A.69.3.5
pfam k141_1468702 k141_1468702_15 17504 19204 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
pfam k141_1468702 k141_1468702_16 19234 20505 - CoA_transf_3
TC k141_1468702 k141_1468702_17 20606 22174 + 3.A.1.30.1
pfam k141_1468702 k141_1468702_18 22181 22879 + Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_20 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam k141_1468702 k141_1468702_19 22881 23765 + UbiA
TC k141_1468702 k141_1468702_20 23746 24603 - 2.A.28.2.4
Gene ID: k141_1468702_11
Type: CAZyme
Location: 13387 - 14133 (-)
Gene ID: k141_1468702_12
Type: pfam
Location: 14374 - 15375 (+)
Gene ID: k141_1468702_13
Type: pfam
Location: 15493 - 16497 (+)
Gene ID: k141_1468702_14
Type: TC
Location: 16544 - 17500 (-)
Gene ID: k141_1468702_15
Type: pfam
Location: 17504 - 19204 (-)
Gene ID: k141_1468702_16
Type: pfam
Location: 19234 - 20505 (-)
Gene ID: k141_1468702_17
Type: TC
Location: 20606 - 22174 (+)
Gene ID: k141_1468702_18
Type: pfam
Location: 22181 - 22879 (+)
Gene ID: k141_1468702_19
Type: pfam
Location: 22881 - 23765 (+)
Gene ID: k141_1468702_20
Type: TC
Location: 23746 - 24603 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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