Cluster: CGMR063490_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR063490
- CGC Family ID: CGCFAM_00170
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1224420 | k141_1224420_22 | 22974 | 25367 | + | 1.B.14.6.7 |
| STP | k141_1224420 | k141_1224420_23 | 25575 | 25985 | + | Glyoxalase |
| TC | k141_1224420 | k141_1224420_24 | 25997 | 27550 | + | 3.B.1.1.2 |
| NULL(UNKNOWN) | k141_1224420 | k141_1224420_25 | 27562 | 27708 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_1224420 | k141_1224420_26 | 27730 | 28164 | + | Biotin_lipoyl |
| CAZyme | k141_1224420 | k141_1224420_27 | 28238 | 30205 | + | GH20 |
| pfam | k141_1224420 | k141_1224420_28 | 30266 | 30619 | - | Asp_decarbox |
| pfam | k141_1224420 | k141_1224420_29 | 30629 | 31480 | - | Pantoate_ligase |
| CAZyme | k141_1224420 | k141_1224420_30 | 31783 | 32586 | + | GT5 |
| pfam | k141_1224420 | k141_1224420_31 | 32586 | 34019 | + | DUF4270 |
| CAZyme | k141_1224420 | k141_1224420_32 | 34095 | 35417 | - | GH57 |
| CAZyme | k141_1224420 | k141_1224420_33 | 35439 | 36707 | - | GT4 |
| CAZyme | k141_1224420 | k141_1224420_34 | 36713 | 38665 | - | GH133 |
Gene ID: k141_1224420_22
Type: TC
Location: 22974 - 25367 (+)
Type: TC
Location: 22974 - 25367 (+)
Gene ID: k141_1224420_23
Type: STP
Location: 25575 - 25985 (+)
Type: STP
Location: 25575 - 25985 (+)
Gene ID: k141_1224420_24
Type: TC
Location: 25997 - 27550 (+)
Type: TC
Location: 25997 - 27550 (+)
Gene ID: k141_1224420_25
Type:
Location: 27562 - 27708 (+)
Type:
Location: 27562 - 27708 (+)
Gene ID: k141_1224420_26
Type: pfam
Location: 27730 - 28164 (+)
Type: pfam
Location: 27730 - 28164 (+)
Gene ID: k141_1224420_27
Type: CAZyme
Location: 28238 - 30205 (+)
Type: CAZyme
Location: 28238 - 30205 (+)
Gene ID: k141_1224420_28
Type: pfam
Location: 30266 - 30619 (-)
Type: pfam
Location: 30266 - 30619 (-)
Gene ID: k141_1224420_29
Type: pfam
Location: 30629 - 31480 (-)
Type: pfam
Location: 30629 - 31480 (-)
Gene ID: k141_1224420_30
Type: CAZyme
Location: 31783 - 32586 (+)
Type: CAZyme
Location: 31783 - 32586 (+)
Gene ID: k141_1224420_31
Type: pfam
Location: 32586 - 34019 (+)
Type: pfam
Location: 32586 - 34019 (+)
Gene ID: k141_1224420_32
Type: CAZyme
Location: 34095 - 35417 (-)
Type: CAZyme
Location: 34095 - 35417 (-)
Gene ID: k141_1224420_33
Type: CAZyme
Location: 35439 - 36707 (-)
Type: CAZyme
Location: 35439 - 36707 (-)
Gene ID: k141_1224420_34
Type: CAZyme
Location: 36713 - 38665 (-)
Type: CAZyme
Location: 36713 - 38665 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
HGM04593
Species
HGM04593 sp017547585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.